RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 UBASH3AP57075 661 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 SLC10A7Q0GE19 358 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 DNASE1L3Q13609 305 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 NADK2Q4G0N4 442 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 FILIP1LQ4L180 1135 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 RALGPS1Q5JS13 557 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 USP45Q70EL2 814 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 MARK2Q7KZI7 788 aaKnown RBP13.77□□□□□ -0.21
SPCS3-204ENST00000513139 EXD1Q8NHP7 514 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 THAP4Q8WY91 577 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 NUDCD1Q96RS6 583 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 SLC25A23Q9BV35 468 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 TRIM55Q9BYV6 548 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 SLC29A3Q9BZD2 475 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 ABCG8Q9H221 673 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 UCK1Q9HA47 277 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 CASS4Q9NQ75 786 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 CNOT8Q9UFF9 292 aaKnown RBP13.77□□□□□ -0.21
SPCS3-204ENST00000513139 TBC1D29Q9UFV1 150 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 ZNHIT2Q9UHR6 403 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 SIK3Q9Y2K2 1263 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 PCDHGB7Q9Y5F8 929 aa13.77□□□□□ -0.21
SPCS3-204ENST00000513139 POLEQ07864 2286 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 TCP11X1B4DZS4 312 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 DFFAO00273 331 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 EPHB6O15197 1021 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 DNAJC6O75061 913 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 CLDN1O95832 211 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 FGF5P12034 268 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 ELAVL4P26378 380 aaKnown RBP13.76□□□□□ -0.21
SPCS3-204ENST00000513139 COL8A1P27658 744 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 TNFRSF8P28908 595 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 CASP14P31944 242 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 MAPK9P45984 424 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 INPP5JQ15735 1006 aaPredicted RBP13.76□□□□□ -0.21
SPCS3-204ENST00000513139 EIF2S3LQ2VIR3 472 aaKnown RBP13.76□□□□□ -0.21
SPCS3-204ENST00000513139 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.76□□□□□ -0.21
SPCS3-204ENST00000513139 CYB5D1Q6P9G0 228 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 ARHGAP36Q6ZRI8 547 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 TSPAN33Q86UF1 283 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 RASGRP3Q8IV61 690 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 RAVER1Q8IY67 606 aaKnown RBP13.76□□□□□ -0.21
SPCS3-204ENST00000513139 PCMTD1Q96MG8 357 aaPredicted RBP13.76□□□□□ -0.21
SPCS3-204ENST00000513139 OR6C1Q96RD1 312 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 ERGIC2Q96RQ1 377 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 ZNF768Q9H5H4 540 aaKnown RBP13.76□□□□□ -0.21
SPCS3-204ENST00000513139 RMI1Q9H9A7 625 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 FAM207AQ9NSI2 230 aaPredicted RBP13.76□□□□□ -0.21
SPCS3-204ENST00000513139 RCOR3Q9P2K3 495 aaPredicted RBP13.76□□□□□ -0.21
SPCS3-204ENST00000513139 CPNE7Q9UBL6 633 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 AP4E1Q9UPM8 1137 aa13.76□□□□□ -0.21
SPCS3-204ENST00000513139 TTC24A2A3L6 582 aaPredicted RBP13.75□□□□□ -0.21
SPCS3-204ENST00000513139 DAPK3O43293 454 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 LRCH4O75427 683 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 PGLSO95336 258 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 LDLRP01130 860 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 ZNF30P17039 623 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 ERCC2P18074 760 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 SOX5P35711 763 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 GFERP55789 205 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 RIPPLY3P57055 190 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 RPL7AP62424 266 aaKnown RBP13.75□□□□□ -0.21
SPCS3-204ENST00000513139 PTSQ03393 145 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 TRAF2Q12933 501 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 ZNF235Q14590 738 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 UGT8Q16880 541 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 CLEC16AQ2KHT3 1053 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 DNAJC24Q6P3W2 148 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 RFX8Q6ZV50 586 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 MON1BQ7L1V2 547 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 CHST15Q7LFX5 561 aaPredicted RBP13.75□□□□□ -0.21
SPCS3-204ENST00000513139 TRIM74Q86UV6 250 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 HPS6Q86YV9 775 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 NDUFAF2Q8N183 169 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 NPWQ8N729 165 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 SCAMP4Q969E2 229 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 MCEEQ96PE7 176 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 PCDHB18PQ96TA0 734 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 MGME1Q9BQP7 344 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 TBC1D10AQ9BXI6 508 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 GPR87Q9BY21 358 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 XPO4Q9C0E2 1151 aaKnown RBP13.75□□□□□ -0.21
SPCS3-204ENST00000513139 GANQ9H2C0 597 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 ACTL8Q9H568 366 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 NOD2Q9HC29 1040 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 LHX9Q9NQ69 397 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 CD84Q9UIB8 345 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 LNPEPQ9UIQ6 1025 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 ZNF451Q9Y4E5 1061 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 SEC16AO15027 2179 aa13.75□□□□□ -0.21
SPCS3-204ENST00000513139 CELSR1Q9NYQ6 3014 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 SPAG6O75602 509 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 ASMTLO95671 621 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 XRCC1P18887 633 aaPredicted RBP13.74□□□□□ -0.21
SPCS3-204ENST00000513139 TNFAIP3P21580 790 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 HCAR3P49019 387 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 ZNF135P52742 658 aaPredicted RBP13.74□□□□□ -0.21
SPCS3-204ENST00000513139 JAM2P57087 298 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 UBE2IP63279 158 aaKnown RBP13.74□□□□□ -0.21
SPCS3-204ENST00000513139 SH3BP2P78314 561 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms