RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 PCDHA2Q9Y5H9 948 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 ISM1B1AKI9 464 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 SCAMP3O14828 347 aaKnown RBP12.41□□□□□ -0.42
COL11A1-210ENST00000512756 PGRMC2O15173 223 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 ACSL4O60488 711 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 CLDN9O95484 217 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 SPAM1P38567 509 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 TREML2Q5T2D2 321 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 FIBCD1Q8N539 461 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 GPR21Q99679 349 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 ACBD6Q9BR61 282 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 HSD3B7Q9H2F3 369 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 SIX2Q9NPC8 291 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 MIOSQ9NXC5 875 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 IGSF9Q9P2J2 1179 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 LRRC14BA6NHZ5 514 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 UGT2B17O75795 530 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 IFNGP01579 166 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 UNGP13051 313 aaPredicted RBP12.41□□□□□ -0.42
COL11A1-210ENST00000512756 TACR2P21452 398 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 OR1D2P34982 312 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 RPS9P46781 194 aaKnown RBP12.41□□□□□ -0.42
COL11A1-210ENST00000512756 NDST2P52849 883 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 TSTD2Q5T7W7 516 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 REP15Q6BDI9 236 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 ARL10Q8N8L6 244 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 AIF1LQ9BQI0 150 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 MAGEH1Q9H213 219 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 GOLGA2P5Q9HBQ8 144 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 RAB23Q9ULC3 237 aa12.41□□□□□ -0.42
COL11A1-210ENST00000512756 MRC1P22897 1456 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 TULP2O00295 520 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 TRMUO75648 421 aaKnown RBP12.4□□□□□ -0.42
COL11A1-210ENST00000512756 KLHL18O94889 574 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 ASLP04424 464 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 CD48P09326 243 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 CYP4B1P13584 511 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 NELFEP18615 380 aaKnown RBP12.4□□□□□ -0.42
COL11A1-210ENST00000512756 OGNP20774 298 aaKnown RBP12.4□□□□□ -0.42
COL11A1-210ENST00000512756 TGFBR2P37173 567 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 SLC5A3P53794 718 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 HNRNPDQ14103 355 aaKnown RBP12.4□□□□□ -0.42
COL11A1-210ENST00000512756 VPS26BQ4G0F5 336 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 IL23RQ5VWK5 629 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 NUSAP1Q9BXS6 441 aaKnown RBP12.4□□□□□ -0.42
COL11A1-210ENST00000512756 IPPKQ9H8X2 491 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 H0Y858 1186 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 GPR25O00155 361 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 BCKDKO14874 412 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 SSNA1O43805 119 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 RHAGQ02094 409 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 MBTD1Q05BQ5 628 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 LPIN1Q14693 890 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 BICRALQ6AI39 1079 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 CRTC3Q6UUV7 619 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 CFAP52Q8N1V2 620 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 TMEM199Q8N511 208 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 NIPA2Q8N8Q9 360 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 PPP1R13LQ8WUF5 828 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 TFAP2BQ92481 460 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 TBATAQ96M53 351 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 CADM1Q9BY67 442 aaKnown RBP12.4□□□□□ -0.42
COL11A1-210ENST00000512756 ALG2Q9H553 416 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 GMIPQ9P107 970 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 CNTN6Q9UQ52 1028 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 RIPK3Q9Y572 518 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 ATG13O75143 517 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 C1RP00736 705 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 IDH3AP50213 366 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 TAS2R41P59536 307 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 MPP1Q00013 466 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 DUSP4Q13115 394 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 DGKZQ13574 1117 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 DDI2Q5TDH0 399 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 CES5AQ6NT32 575 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 CCDC185Q8N715 623 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 DPF3Q92784 378 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 SLCO2A1Q92959 643 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 SPACA7Q96KW9 195 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 TTLL2Q9BWV7 592 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 WBP11Q9Y2W2 641 aaKnown RBP12.4□□□□□ -0.42
COL11A1-210ENST00000512756 PCDHGB3Q9Y5G1 929 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.4□□□□□ -0.42
COL11A1-210ENST00000512756 IGKV6D-41A0A0C4DH26 115 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 PER2O15055 1255 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 SLC7A4O43246 635 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 UGT1A5P35504 534 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 ELP6Q0PNE2 266 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 CBX2Q14781 532 aaPredicted RBP12.4□□□□□ -0.42
COL11A1-210ENST00000512756 ASTE1Q2TB18 679 aaPredicted RBP12.4□□□□□ -0.42
COL11A1-210ENST00000512756 DENND6AQ8IWF6 608 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 FERD3LQ96RJ6 166 aa12.4□□□□□ -0.42
COL11A1-210ENST00000512756 PDP1Q9P0J1 537 aaPredicted RBP12.4□□□□□ -0.42
COL11A1-210ENST00000512756 AKAP7Q9P0M2 348 aaPredicted RBP12.4□□□□□ -0.42
COL11A1-210ENST00000512756 MRPS33Q9Y291 106 aaKnown RBP12.4□□□□□ -0.42
COL11A1-210ENST00000512756 FABP3P05413 133 aa12.4□□□□□ -0.43
COL11A1-210ENST00000512756 SP100P23497 879 aaPredicted RBP12.4□□□□□ -0.43
COL11A1-210ENST00000512756 SSR2P43308 183 aa12.4□□□□□ -0.43
COL11A1-210ENST00000512756 PEX6Q13608 980 aa12.4□□□□□ -0.43
COL11A1-210ENST00000512756 FAM110CQ1W6H9 321 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms