RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 PXNP49023 591 aaPredicted RBP10.78□□□□□ -0.68
PFDN1-204ENST00000512707 SLC12A2P55011 1212 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 CTBP1Q13363 440 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 ITIH4Q14624 930 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 EFTUD2Q15029 972 aaKnown RBP eCLIP10.78□□□□□ -0.68
PFDN1-204ENST00000512707 TMED2Q15363 201 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 TYSND1Q2T9J0 566 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 ATP13A5Q4VNC0 1218 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 UBAP2Q5T6F2 1119 aaKnown RBP10.78□□□□□ -0.68
PFDN1-204ENST00000512707 KIAA0895LQ68EN5 471 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 PACS1Q6VY07 963 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 SERPINA9Q86WD7 417 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 C1orf210Q8IVY1 113 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 DENND6AQ8IWF6 608 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 DTWD2Q8NBA8 298 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 EPS8L3Q8TE67 593 aaKnown RBP10.78□□□□□ -0.68
PFDN1-204ENST00000512707 SLC39A7Q92504 469 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 FOXJ1Q92949 421 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 VPS39Q96JC1 886 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 VPS35Q96QK1 796 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 TSSK1BQ9BXA7 367 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 GPR174Q9BXC1 333 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 FAM126AQ9BYI3 521 aaPredicted RBP10.78□□□□□ -0.68
PFDN1-204ENST00000512707 CLPBQ9H078 707 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 RHOJQ9H4E5 214 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 PRMT8Q9NR22 394 aaPredicted RBP10.78□□□□□ -0.68
PFDN1-204ENST00000512707 ZFR2Q9UPR6 939 aaKnown RBP10.78□□□□□ -0.68
PFDN1-204ENST00000512707 DMTF1Q9Y222 760 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 COMMD10Q9Y6G5 202 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 ATG2BQ96BY7 2078 aa10.78□□□□□ -0.68
PFDN1-204ENST00000512707 SPTBN4Q9H254 2564 aa10.77□□□□□ -0.68
PFDN1-204ENST00000512707 TRBV5-4A0A0C4DH59 114 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 MEI4A8MW99 385 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 QSOX1O00391 747 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 GAPDHSO14556 408 aaPredicted RBP10.77□□□□□ -0.69
PFDN1-204ENST00000512707 FPGTO14772 594 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 SLC31A1O15431 190 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 UGT1A9O60656 530 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 SLC25A14O95258 325 aaPredicted RBP10.77□□□□□ -0.69
PFDN1-204ENST00000512707 PAK4O96013 591 aaPredicted RBP10.77□□□□□ -0.69
PFDN1-204ENST00000512707 PCCBP05166 539 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 SNRPAP09012 282 aaKnown RBP10.77□□□□□ -0.69
PFDN1-204ENST00000512707 UGT1A6P19224 532 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 MSH3P20585 1137 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 UGT1A1P22309 533 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 UGT1A4P22310 534 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 HNRNPA2B1P22626 353 aaKnown RBP10.77□□□□□ -0.69
PFDN1-204ENST00000512707 TEAD1P28347 426 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 UGT1A3P35503 534 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 UGT1A5P35504 534 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 NSG1P42857 185 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 POLD2P49005 469 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 LIMK2P53671 638 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 PPP2CBP62714 309 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 PPP2CAP67775 309 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 RPL6Q02878 288 aaKnown RBP10.77□□□□□ -0.69
PFDN1-204ENST00000512707 CSTF1Q05048 431 aaKnown RBP10.77□□□□□ -0.69
PFDN1-204ENST00000512707 DNAJC3Q13217 504 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 GTF2H3Q13889 308 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 PSAPL1Q6NUJ1 521 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 PNCKQ6P2M8 343 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 ADGRD1Q6QNK2 874 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 ADAMTSL4Q6UY14 1074 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 RFLNAQ6ZTI6 216 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 CADM4Q8NFZ8 388 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 DCAKDQ8WVC6 231 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 BTN2A2Q8WVV5 523 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 RLN3Q8WXF3 142 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 SNX19Q92543 992 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 GLYATL1Q969I3 302 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 TSPAN17Q96FV3 270 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 LENG8Q96PV6 779 aaPredicted RBP10.77□□□□□ -0.69
PFDN1-204ENST00000512707 RBBP8Q99708 897 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 DHRS4Q9BTZ2 278 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 FAM96AQ9H5X1 160 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 WDR26Q9H7D7 661 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 UGT1A7Q9HAW7 530 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 UGT1A10Q9HAW8 530 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 UGT1A8Q9HAW9 530 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 FBXO6Q9NRD1 293 aaPredicted RBP10.77□□□□□ -0.69
PFDN1-204ENST00000512707 SMYD2Q9NRG4 433 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 PHPT1Q9NRX4 125 aaPredicted RBP10.77□□□□□ -0.69
PFDN1-204ENST00000512707 ZNF446Q9NWS9 450 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 ZDHHC3Q9NYG2 299 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 MARCH4Q9P2E8 410 aaPredicted RBP10.77□□□□□ -0.69
PFDN1-204ENST00000512707 TBK1Q9UHD2 729 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 GNPTGQ9UJJ9 305 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 FBXO4Q9UKT5 387 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 PCDHB1Q9Y5F3 818 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 NFS1Q9Y697 457 aa10.77□□□□□ -0.69
PFDN1-204ENST00000512707 PTPRZ1P23471 2315 aaPredicted RBP10.76□□□□□ -0.69
PFDN1-204ENST00000512707 FAM186AA6NE01 2351 aa10.76□□□□□ -0.69
PFDN1-204ENST00000512707 RIF1Q5UIP0 2472 aaKnown RBP10.76□□□□□ -0.69
PFDN1-204ENST00000512707 AGAP14A8MT82 685 aa10.76□□□□□ -0.69
PFDN1-204ENST00000512707 PRAMEF26H0Y7S4 382 aa10.76□□□□□ -0.69
PFDN1-204ENST00000512707 CACNB4O00305 520 aaPredicted RBP10.76□□□□□ -0.69
PFDN1-204ENST00000512707 TOR1BO14657 336 aa10.76□□□□□ -0.69
PFDN1-204ENST00000512707 PRMT5O14744 637 aaPredicted RBP10.76□□□□□ -0.69
PFDN1-204ENST00000512707 LATO43561 262 aa10.76□□□□□ -0.69
PFDN1-204ENST00000512707 PIAS1O75925 651 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms