RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 COX18Q8N8Q8 333 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 ELOA3Q8NG57 546 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 ACER1Q8TDN7 264 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 POF1BQ8WVV4 589 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 AIFM3Q96NN9 605 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 CHP1Q99653 195 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 C17orf62Q9BQA9 187 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 FEM1AQ9BSK4 669 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 RTKNQ9BST9 563 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 SEZ6LQ9BYH1 1024 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 TSPAN16Q9UKR8 245 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 NDUFAF1Q9Y375 327 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 DHRS7Q9Y394 339 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 ACTL7BQ9Y614 415 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 NPIPA2E9PIF3 369 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 NPIPA3F8WFD2 350 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 BRINP1O60477 761 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 MFAP3LO75121 409 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 PPP1R37O75864 691 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 ZNF8P17098 575 aaPredicted RBP8.89□□□□□ -0.99
VCAN-208ENST00000512590 TROAPQ12815 778 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 TRIM16LQ309B1 348 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 ECHDC2Q86YB7 292 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 CFAP206Q8IYR0 622 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 ARMC10Q8N2F6 343 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 NKAPQ8N5F7 415 aaKnown RBP8.89□□□□□ -0.99
VCAN-208ENST00000512590 ZNF433Q8N7K0 673 aaPredicted RBP8.89□□□□□ -0.99
VCAN-208ENST00000512590 C22orf15Q8WYQ4 148 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 AZIN2Q96A70 460 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 KLHL32Q96NJ5 620 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 CEP41Q9BYV8 373 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 SEMA4BQ9NPR2 832 aaPredicted RBP8.89□□□□□ -0.99
VCAN-208ENST00000512590 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.88□□□□□ -0.99
VCAN-208ENST00000512590 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.88□□□□□ -0.99
VCAN-208ENST00000512590 A0A1W2PQ67 120 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 TCP11X1B4DZS4 312 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 HHLA1C9JL84 531 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 TMX2-CTNND1H3BSU7 103 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 ALDOAP04075 364 aaKnown RBP8.88□□□□□ -0.99
VCAN-208ENST00000512590 MAGEA4P43358 317 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 RPS9P46781 194 aaKnown RBP8.88□□□□□ -0.99
VCAN-208ENST00000512590 SPIBQ01892 262 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 SIM2Q14190 667 aaPredicted RBP8.88□□□□□ -0.99
VCAN-208ENST00000512590 ZC3H12AQ5D1E8 599 aaKnown RBP8.88□□□□□ -0.99
VCAN-208ENST00000512590 ABHD17BQ5VST6 288 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 KCNMB4Q86W47 210 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 LONP2Q86WA8 852 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 TBC1D10CQ8IV04 446 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 VSTM4Q8IW00 320 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 DEFB106AQ8N104 65 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 CLEC1AQ8NC01 280 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 ZDHHC16Q969W1 377 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 C8orf48Q96LL4 319 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 C9orf72Q96LT7 481 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 PTPN18Q99952 460 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 NAT9Q9BTE0 207 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 PCDHB16Q9NRJ7 776 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 ARL8BQ9NVJ2 186 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 GDAP2Q9NXN4 497 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 TMX2Q9Y320 296 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 PRR5-ARHGAP8B1AHC4 643 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 OTCP00480 354 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 PRKCHP24723 683 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 IL12RB1P42701 662 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 PPP3CAQ08209 521 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 ZNF311Q5JNZ3 666 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 LCN1P1Q5VSP4 162 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 C1orf189Q5VU69 101 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 GPR141Q7Z602 305 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 EMC1Q8N766 993 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 NANOS1Q8WY41 292 aaKnown RBP8.88□□□□□ -0.99
VCAN-208ENST00000512590 SLC22A18Q96BI1 424 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 TMEM74Q96NL1 305 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 RAB11FIP5Q9BXF6 653 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 EIF2AK4Q9P2K8 1649 aaKnown RBP8.88□□□□□ -0.99
VCAN-208ENST00000512590 FFAR3O14843 346 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 GPR42O15529 346 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 DHX15O43143 795 aaKnown RBP8.88□□□□□ -0.99
VCAN-208ENST00000512590 AP5Z1O43299 807 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 RPS3P23396 243 aaKnown RBP eCLIP8.88□□□□□ -0.99
VCAN-208ENST00000512590 ZBTB6Q15916 424 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 DNM1P34Q6PK57 102 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 CDH24Q86UP0 819 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 RANBP3LQ86VV4 465 aaPredicted RBP8.88□□□□□ -0.99
VCAN-208ENST00000512590 OR4C15Q8NGM1 316 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 CCDC86Q9H6F5 360 aaKnown RBP8.88□□□□□ -0.99
VCAN-208ENST00000512590 RC3H2Q9HBD1 1191 aaKnown RBP8.88□□□□□ -0.99
VCAN-208ENST00000512590 COQ3Q9NZJ6 369 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 ADAM28Q9UKQ2 775 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 A0A087X1B8 175 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 LACTBL1A8MY62 500 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 ZNF878C9JN71 531 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 FTCDNL1E5RQL4 147 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 PGRMC2O15173 223 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 INPPL1O15357 1258 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 BCAS1O75363 584 aaPredicted RBP8.88□□□□□ -0.99
VCAN-208ENST00000512590 PFKLP17858 780 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 DPP6P42658 865 aa8.88□□□□□ -0.99
VCAN-208ENST00000512590 NR0B1P51843 470 aaKnown RBP8.88□□□□□ -0.99
VCAN-208ENST00000512590 HSD17B7P56937 341 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms