RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 TMEM26Q6ZUK4 368 aa10.62□□□□□ -0.71
SNF8-207ENST00000509995 TRIM74Q86UV6 250 aa10.62□□□□□ -0.71
SNF8-207ENST00000509995 TMEM126BQ8IUX1 230 aa10.62□□□□□ -0.71
SNF8-207ENST00000509995 SIDT2Q8NBJ9 832 aaKnown RBP10.62□□□□□ -0.71
SNF8-207ENST00000509995 LRRN4CLQ8ND94 238 aa10.62□□□□□ -0.71
SNF8-207ENST00000509995 ZNF397Q8NF99 534 aaPredicted RBP10.62□□□□□ -0.71
SNF8-207ENST00000509995 ZNF606Q8WXB4 792 aa10.62□□□□□ -0.71
SNF8-207ENST00000509995 RSC1A1Q92681 617 aa10.62□□□□□ -0.71
SNF8-207ENST00000509995 ECHDC3Q96DC8 303 aa10.62□□□□□ -0.71
SNF8-207ENST00000509995 SLC41A2Q96JW4 573 aa10.62□□□□□ -0.71
SNF8-207ENST00000509995 ZNF514Q96K75 400 aaPredicted RBP10.62□□□□□ -0.71
SNF8-207ENST00000509995 LRFN5Q96NI6 719 aa10.62□□□□□ -0.71
SNF8-207ENST00000509995 IP6K3Q96PC2 410 aa10.62□□□□□ -0.71
SNF8-207ENST00000509995 TBCBQ99426 244 aa10.62□□□□□ -0.71
SNF8-207ENST00000509995 TREX2Q9BQ50 279 aaPredicted RBP10.62□□□□□ -0.71
SNF8-207ENST00000509995 MLPHQ9BV36 600 aaPredicted RBP10.62□□□□□ -0.71
SNF8-207ENST00000509995 KLC2Q9H0B6 622 aa10.62□□□□□ -0.71
SNF8-207ENST00000509995 RETREG1Q9H6L5 497 aa10.62□□□□□ -0.71
SNF8-207ENST00000509995 ATP13A3Q9H7F0 1226 aa10.62□□□□□ -0.71
SNF8-207ENST00000509995 TNFRSF10DQ9UBN6 386 aa10.62□□□□□ -0.71
SNF8-207ENST00000509995 B4GALT6Q9UBX8 382 aa10.62□□□□□ -0.71
SNF8-207ENST00000509995 NEU3Q9UQ49 428 aa10.62□□□□□ -0.71
SNF8-207ENST00000509995 MAPK8IP1Q9UQF2 711 aa10.62□□□□□ -0.71
SNF8-207ENST00000509995 OR5K4A6NMS3 321 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 MEN1O00255 615 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 SOD1P00441 154 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 ERBB2P04626 1255 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 CAPN1P07384 714 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 EBLN1P0CF75 366 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 OTX2P32243 289 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 SLC6A3Q01959 620 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 CYTH1Q15438 398 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 TMEM198Q66K66 360 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 RWDD4Q6NW29 188 aaKnown RBP10.61□□□□□ -0.71
SNF8-207ENST00000509995 GFRALQ6UXV0 394 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 MEX3BQ6ZN04 569 aaKnown RBP10.61□□□□□ -0.71
SNF8-207ENST00000509995 RRAGAQ7L523 313 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 CEP57L1Q8IYX8 460 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 DSELQ8IZU8 1212 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 WDTC1Q8N5D0 677 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 DNAJB14Q8TBM8 379 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 NRGNQ92686 78 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 ARSGQ96EG1 525 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 ZDHHC12Q96GR4 267 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 CNDP1Q96KN2 507 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 SMR3AQ99954 134 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 CBX8Q9HC52 389 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 TMEM51Q9NW97 253 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.61□□□□□ -0.71
SNF8-207ENST00000509995 SEMA5BQ9P283 1151 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 SH3BGRL2Q9UJC5 107 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 CNTN6Q9UQ52 1028 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 KCNK6Q9Y257 313 aa10.61□□□□□ -0.71
SNF8-207ENST00000509995 PCYT1BQ9Y5K3 369 aaPredicted RBP10.61□□□□□ -0.71
SNF8-207ENST00000509995 INTS1Q8N201 2190 aaKnown RBP10.6□□□□□ -0.71
SNF8-207ENST00000509995 MXRA5Q9NR99 2828 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 IGHV5-51A0A0C4DH38 117 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 CETN3O15182 167 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 SNX2O60749 519 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 CUTAO60888 179 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 IGHEP01854 428 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 KRT5P13647 590 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 GNA15P30679 374 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 ARCN1P48444 511 aaKnown RBP10.6□□□□□ -0.71
SNF8-207ENST00000509995 SMSP52788 366 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 SOX8P57073 446 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 POLR2LP62875 67 aaKnown RBP10.6□□□□□ -0.71
SNF8-207ENST00000509995 NRG1Q02297 640 aaPredicted RBP10.6□□□□□ -0.71
SNF8-207ENST00000509995 GCNT1Q02742 428 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 NCF4Q15080 339 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.6□□□□□ -0.71
SNF8-207ENST00000509995 SLC25A52Q3SY17 297 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 PLEKHS1Q5SXH7 462 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 DENND2CQ68D51 928 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 IRGCQ6NXR0 463 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 IGFL2Q6UWQ7 119 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 TMEM207Q6UWW9 146 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 ADAMTSL4Q6UY14 1074 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 CHST15Q7LFX5 561 aaPredicted RBP10.6□□□□□ -0.71
SNF8-207ENST00000509995 FAM131BQ86XD5 332 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 LZTR1Q8N653 840 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 PAF1Q8N7H5 531 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 NR4A3Q92570 626 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 UBXN4Q92575 508 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 NINJ1Q92982 152 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 SLC35C1Q96A29 364 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 PLEKHG4BQ96PX9 1271 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 TMEM121Q9BTD3 319 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 NOL6Q9H6R4 1146 aaKnown RBP10.6□□□□□ -0.71
SNF8-207ENST00000509995 ACP6Q9NPH0 428 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 CCM2LQ9NUG4 571 aaPredicted RBP10.6□□□□□ -0.71
SNF8-207ENST00000509995 EPHA6Q9UF33 1036 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 OR12D3Q9UGF7 316 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 PRKAB1Q9Y478 270 aa10.6□□□□□ -0.71
SNF8-207ENST00000509995 ANKRD12Q6UB98 2062 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 MASP2O00187 686 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 HEXIM1O94992 359 aaKnown RBP10.59□□□□□ -0.71
SNF8-207ENST00000509995 JCHAINP01591 159 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 RORAP35398 523 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 GPR1P46091 355 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms