RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 ARFGAP1Q8N6T3 406 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 GPR156Q8NFN8 814 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 HCAR2Q8TDS4 363 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 PAQR8Q8TEZ7 354 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 SLC44A1Q8WWI5 657 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 OR1E3Q8WZA6 343 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 LPPQ93052 612 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 PHKBQ93100 1093 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 PGAP3Q96FM1 320 aaPredicted RBP4.53□□□□□ -1.68
NIPBL-206ENST00000509429 RMND5BQ96G75 393 aaPredicted RBP4.53□□□□□ -1.68
NIPBL-206ENST00000509429 MAGED4Q96JG8 741 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 FAM227BQ96M60 508 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 MED15Q96RN5 788 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 KCNK16Q96T55 309 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 UHRF1Q96T88 793 aaPredicted RBP4.53□□□□□ -1.68
NIPBL-206ENST00000509429 P2RX7Q99572 595 aaKnown RBP4.53□□□□□ -1.68
NIPBL-206ENST00000509429 TBC1D10AQ9BXI6 508 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 UBXN6Q9BZV1 441 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 CD244Q9BZW8 370 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 TRIM15Q9C019 465 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 EPN3Q9H201 632 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 OPA3Q9H6K4 179 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 EXO5Q9H790 373 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 TRPC7Q9HCX4 862 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 DMAP1Q9NPF5 467 aaPredicted RBP4.53□□□□□ -1.68
NIPBL-206ENST00000509429 CENPMQ9NSP4 180 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 FBXO28Q9NVF7 368 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 DDX43Q9NXZ2 648 aaKnown RBP4.53□□□□□ -1.68
NIPBL-206ENST00000509429 HACD3Q9P035 362 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 DBF4Q9UBU7 674 aaPredicted RBP4.53□□□□□ -1.68
NIPBL-206ENST00000509429 ATP6V1HQ9UI12 483 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 FEM1BQ9UK73 627 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 ZNF215Q9UL58 517 aaPredicted RBP4.53□□□□□ -1.68
NIPBL-206ENST00000509429 PACSIN2Q9UNF0 486 aaPredicted RBP4.53□□□□□ -1.68
NIPBL-206ENST00000509429 MTMR6Q9Y217 621 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 ENTPD4Q9Y227 616 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 ERGIC3Q9Y282 383 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 AP3M1Q9Y2T2 418 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 EMC9Q9Y3B6 208 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 USP15Q9Y4E8 981 aaPredicted RBP4.53□□□□□ -1.68
NIPBL-206ENST00000509429 PCDHA2Q9Y5H9 948 aa4.53□□□□□ -1.68
NIPBL-206ENST00000509429 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.53□□□□□ -1.68
NIPBL-206ENST00000509429 ARHGAP5Q13017 1502 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 WDR7Q9Y4E6 1490 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 TRAV34A0A0B4J273 112 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 A0A1B0GVG6 124 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 A0A1W2PN81 502 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 A0A1W2PQH9 124 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 FUOMA2VDF0 154 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 BLACEA4D250 179 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 CCDC154A6NI56 674 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 SRRM3A6NNA2 597 aaPredicted RBP4.52□□□□□ -1.69
NIPBL-206ENST00000509429 ZNF891A8MT65 544 aaPredicted RBP4.52□□□□□ -1.69
NIPBL-206ENST00000509429 IQCF5A8MTL0 148 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 MIF4GDA9UHW6 222 aaKnown RBP4.52□□□□□ -1.69
NIPBL-206ENST00000509429 CENPBD1B2RD01 187 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 FAM47E-STBD1D6RA91 191 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 PRR23D1E9PI22 279 aaPredicted RBP4.52□□□□□ -1.69
NIPBL-206ENST00000509429 PSMD11O00231 422 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 HIP1O00291 1037 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 ZNF263O14978 683 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 ATP9AO75110 1047 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 MTX2O75431 263 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 PSIP1O75475 530 aaKnown RBP4.52□□□□□ -1.69
NIPBL-206ENST00000509429 ZNF821O75541 412 aaPredicted RBP4.52□□□□□ -1.69
NIPBL-206ENST00000509429 MFN2O95140 757 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 PGLSO95336 258 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 METTL18O95568 372 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 OXSR1O95747 527 aaPredicted RBP4.52□□□□□ -1.69
NIPBL-206ENST00000509429 PTBP3O95758 552 aaKnown RBP4.52□□□□□ -1.69
NIPBL-206ENST00000509429 A1BGP04217 495 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 CYC1P08574 325 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 PRR23D2P0DMB1 279 aaPredicted RBP4.52□□□□□ -1.69
NIPBL-206ENST00000509429 LAMP2P13473 410 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 RPA1P27694 616 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 PTPN4P29074 926 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 PDHA2P29803 388 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 CXCR5P32302 372 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 SLC8A1P32418 973 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 SHMT1P34896 483 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 IGFALSP35858 605 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 CHRNA7P36544 502 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 SERPINF1P36955 418 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 MAGEA1P43355 309 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 KRT6CP48668 564 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 CDH6P55285 790 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 PRAMEP78395 509 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 UBE3AQ05086 875 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 NPRL3Q12980 569 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 TUSC3Q13454 348 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 CAPRIN1Q14444 709 aaKnown RBP4.52□□□□□ -1.69
NIPBL-206ENST00000509429 CNN3Q15417 329 aaKnown RBP4.52□□□□□ -1.69
NIPBL-206ENST00000509429 SEC23AQ15436 765 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 TSC22D1Q15714 1073 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 WHAMMP3Q1A5X7 153 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 SLC35G1Q2M3R5 365 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 TWISTNBQ3B726 338 aaPredicted RBP4.52□□□□□ -1.69
NIPBL-206ENST00000509429 ZNF829Q3KNS6 432 aaPredicted RBP4.52□□□□□ -1.69
NIPBL-206ENST00000509429 MCMDC2Q4G0Z9 681 aa4.52□□□□□ -1.69
NIPBL-206ENST00000509429 SPATA46Q5T0L3 261 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms