RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 ANKRD11Q6UB99 2663 aaPredicted RBP15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 GOLGA6L3A6NEY3 463 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 CHUKO15111 745 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 BUD23O43709 281 aaKnown RBP15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 NUDT21O43809 227 aaKnown RBP15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 UGT1A9O60656 530 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 CSO75390 466 aaKnown RBP15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 ECEL1O95672 775 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 UGT1A6P19224 532 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 UGT1A1P22309 533 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 UGT1A4P22310 534 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 CA5AP35218 305 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 UGT1A3P35503 534 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 UGT1A5P35504 534 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 B4GALNT1Q00973 533 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 OASLQ15646 514 aaKnown RBP15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 CHRNA6Q15825 494 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 ZDHHC20Q5W0Z9 365 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 WDR48Q8TAF3 677 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 BRSK1Q8TDC3 778 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 GRAMD1AQ96CP6 724 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 DEPDC7Q96QD5 511 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 FRMD8P1Q9BZ68 369 aaPredicted RBP15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 OR2AG1Q9H205 316 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 LRRN3Q9H3W5 708 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 UGT1A7Q9HAW7 530 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 UGT1A10Q9HAW8 530 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 UGT1A8Q9HAW9 530 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 KCTD3Q9Y597 815 aa15.97■□□□□ 0.15
PDLIM5-212ENST00000509333 B4DGG1 531 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 PPM1DO15297 605 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 GRID2O43424 1007 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 LIASO43766 372 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 USP12O75317 370 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 PPFIA2O75334 1257 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 TCEA3O75764 348 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 EML2O95834 649 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 SLC4A1P02730 911 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 LPOP22079 712 aaPredicted RBP15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 ACTR1BP42025 376 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 ACTR1AP61163 376 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 TMEM115Q12893 351 aaPredicted RBP15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 PEX6Q13608 980 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 LRP8Q14114 963 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 SIX1Q15475 284 aaPredicted RBP15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 KHDC1Q4VXA5 237 aaKnown RBP15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 ZNF569Q5MCW4 686 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 SEL1L2Q5TEA6 688 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 RBM44Q6ZP01 1051 aaKnown RBP15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 ARHGEF18Q6ZSZ5 1173 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 CHST15Q7LFX5 561 aaPredicted RBP15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 Q8N9G6 341 aaPredicted RBP15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 C1orf54Q8WWF1 131 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 PATE1Q8WXA2 126 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 ATG4AQ8WYN0 398 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 RTP4Q96DX8 246 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 PPP1R2P1Q96PQ5 205 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 VPS35Q96QK1 796 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 FSD1LQ9BXM9 530 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 ENTPD2Q9Y5L3 495 aa15.96■□□□□ 0.15
PDLIM5-212ENST00000509333 ZZEF1O43149 2961 aa15.96■□□□□ 0.14
PDLIM5-212ENST00000509333 FREM2Q5SZK8 3169 aa15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 TRBV23OR9-2A0A075B6M9 112 aa15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 A0A1W2PNU3 283 aaPredicted RBP15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 GPR89AB7ZAQ6 455 aa15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 GAPDHSO14556 408 aaPredicted RBP15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 STX7O15400 261 aaKnown RBP15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 GPR89BP0CG08 455 aa15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 LSSP48449 732 aa15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 CLCNKAP51800 687 aa15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 MAZP56270 477 aaKnown RBP15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 TAF1AQ15573 450 aaPredicted RBP15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 IYDQ6PHW0 289 aa15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 GLT6D1Q7Z4J2 308 aa15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 ZNF438Q7Z4V0 828 aa15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 TRIM58Q8NG06 486 aa15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 ZNF398Q8TD17 642 aa15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 ALS2CR12Q96Q35 445 aa15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 TBL1YQ9BQ87 522 aa15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 TBC1D29Q9UFV1 150 aa15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 SLC23A2Q9UGH3 650 aa15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 DRG1Q9Y295 367 aaKnown RBP15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 PKP3Q9Y446 797 aa15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 ARL5AQ9Y689 179 aa15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 AK5Q9Y6K8 562 aa15.95■□□□□ 0.14
PDLIM5-212ENST00000509333 C2orf81A6NN90 581 aa15.94■□□□□ 0.14
PDLIM5-212ENST00000509333 PSMD3O43242 534 aa15.94■□□□□ 0.14
PDLIM5-212ENST00000509333 NRDCO43847 1150 aa15.94■□□□□ 0.14
PDLIM5-212ENST00000509333 VEGFDO43915 354 aa15.94■□□□□ 0.14
PDLIM5-212ENST00000509333 MTX2O75431 263 aa15.94■□□□□ 0.14
PDLIM5-212ENST00000509333 KRT37O76014 449 aa15.94■□□□□ 0.14
PDLIM5-212ENST00000509333 CDK14O94921 469 aa15.94■□□□□ 0.14
PDLIM5-212ENST00000509333 RPLP0P05388 317 aaKnown RBP15.94■□□□□ 0.14
PDLIM5-212ENST00000509333 SPAM1P38567 509 aa15.94■□□□□ 0.14
PDLIM5-212ENST00000509333 CCNG2Q16589 344 aa15.94■□□□□ 0.14
PDLIM5-212ENST00000509333 ZNF547Q8IVP9 402 aa15.94■□□□□ 0.14
PDLIM5-212ENST00000509333 REXO1L1PQ8IX06 675 aa15.94■□□□□ 0.14
PDLIM5-212ENST00000509333 OR4K2Q8NGD2 314 aa15.94■□□□□ 0.14
PDLIM5-212ENST00000509333 ATXN7L3BQ96GX2 97 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms