RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 ZNF852Q6ZMS4 543 aa5.06□□□□□ -1.6
TOPBP1-206ENST00000508524 KCTD8Q6ZWB6 473 aa5.06□□□□□ -1.6
TOPBP1-206ENST00000508524 CACNA2D4Q7Z3S7 1137 aa5.06□□□□□ -1.6
TOPBP1-206ENST00000508524 FAM72BQ86X60 149 aa5.06□□□□□ -1.6
TOPBP1-206ENST00000508524 EPHX4Q8IUS5 362 aa5.06□□□□□ -1.6
TOPBP1-206ENST00000508524 SMAP1Q8IYB5 467 aaPredicted RBP5.06□□□□□ -1.6
TOPBP1-206ENST00000508524 TAAR8Q969N4 342 aa5.06□□□□□ -1.6
TOPBP1-206ENST00000508524 IGSF8Q969P0 613 aa5.06□□□□□ -1.6
TOPBP1-206ENST00000508524 QRFPRQ96P65 431 aa5.06□□□□□ -1.6
TOPBP1-206ENST00000508524 HCFC1R1Q9NWW0 138 aa5.06□□□□□ -1.6
TOPBP1-206ENST00000508524 ACSL5Q9ULC5 683 aa5.06□□□□□ -1.6
TOPBP1-206ENST00000508524 TCF19Q9Y242 345 aa5.06□□□□□ -1.6
TOPBP1-206ENST00000508524 CRYL1Q9Y2S2 319 aa5.06□□□□□ -1.6
TOPBP1-206ENST00000508524 KIF27Q86VH2 1401 aa5.06□□□□□ -1.6
TOPBP1-206ENST00000508524 FAM237AA0A1B0GTK4 181 aa5.05□□□□□ -1.6
TOPBP1-206ENST00000508524 CTAGE9A4FU28 777 aa5.05□□□□□ -1.6
TOPBP1-206ENST00000508524 CTAGE8P0CG41 777 aa5.05□□□□□ -1.6
TOPBP1-206ENST00000508524 ICAM3P32942 547 aa5.05□□□□□ -1.6
TOPBP1-206ENST00000508524 HARS2P49590 506 aaKnown RBP5.05□□□□□ -1.6
TOPBP1-206ENST00000508524 OLIG2Q13516 323 aa5.05□□□□□ -1.6
TOPBP1-206ENST00000508524 CDC73Q6P1J9 531 aa5.05□□□□□ -1.6
TOPBP1-206ENST00000508524 ARMC8Q8IUR7 673 aa5.05□□□□□ -1.6
TOPBP1-206ENST00000508524 CTAGE4Q8IX94 777 aa5.05□□□□□ -1.6
TOPBP1-206ENST00000508524 SRBD1Q8N5C6 995 aaKnown RBP5.05□□□□□ -1.6
TOPBP1-206ENST00000508524 SLC38A5Q8WUX1 472 aa5.05□□□□□ -1.6
TOPBP1-206ENST00000508524 RRP36Q96EU6 259 aaKnown RBP5.05□□□□□ -1.6
TOPBP1-206ENST00000508524 PCGF1Q9BSM1 259 aa5.05□□□□□ -1.6
TOPBP1-206ENST00000508524 FKRPQ9H9S5 495 aa5.05□□□□□ -1.6
TOPBP1-206ENST00000508524 EFCAB5A4FU69 1503 aa5.05□□□□□ -1.6
TOPBP1-206ENST00000508524 TGFB1I1O43294 461 aa5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 CGAP01215 116 aa5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 AMBPP02760 352 aa5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 IL7RP16871 459 aa5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 CDKN1AP38936 164 aa5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 APOBEC1P41238 236 aaKnown RBP5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 EEF1A1P68104 462 aaKnown RBP5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 RUNX1T1Q06455 604 aa5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 TBX2Q13207 712 aaPredicted RBP5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 CEP85LQ5SZL2 805 aa5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 EEF1A1P5Q5VTE0 462 aa5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 ACAD10Q6JQN1 1059 aa5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 RAD9BQ6WBX8 426 aa5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 APBB2Q92870 758 aa5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 ZUFSPQ96AP4 578 aa5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 ZNF501Q96CX3 271 aaPredicted RBP5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 PIP5K1AQ99755 562 aa5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 POLR3CQ9BUI4 534 aaPredicted RBP5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 SLC28A3Q9HAS3 691 aa5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 SCPEP1Q9HB40 452 aa5.04□□□□□ -1.6
TOPBP1-206ENST00000508524 TCOF1Q13428 1488 aaKnown RBP5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 A6NLC8 198 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 ZNHIT1O43257 154 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 ZG16O60844 167 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 EIF3JO75822 258 aaKnown RBP5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 ZNF182P17025 639 aaPredicted RBP5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 HOXC9P31274 260 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 UBA7P41226 1012 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 CLDN20P56880 219 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 HILS1P60008 231 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 GRIK2Q13002 908 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 SIRPB2Q5JXA9 342 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 DCST1Q5T197 706 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 PDSS1Q5T2R2 415 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 C18orf63Q68DL7 685 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 TTI2Q6NXR4 508 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 CNTROBQ8N137 903 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 TSPYL6Q8N831 410 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 KLHDC9Q8NEP7 349 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 OR14L1PQ8NHC6 308 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 THAP6Q8TBB0 222 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 MORC4Q8TE76 937 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 FBXO17Q96EF6 278 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 RRNAD1Q96FB5 475 aaKnown RBP5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 EIF2AK1Q9BQI3 630 aaKnown RBP5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 STRA6Q9BX79 667 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 TAS2R10Q9NYW0 307 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 FBXL2Q9UKC9 423 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 KLHL20Q9Y2M5 609 aa5.03□□□□□ -1.6
TOPBP1-206ENST00000508524 ATP10AO60312 1499 aa5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 NPIPB15A6NHN6 443 aaPredicted RBP5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 DVL1O14640 695 aa5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 TPD52L2O43399 206 aaKnown RBP5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 PAGE4O60829 102 aa5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 NKX2-2O95096 273 aa5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 FAM106CPP0CH98 169 aa5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 UBL4AP11441 157 aa5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 POLR2CP19387 275 aaPredicted RBP5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 NR1D1P20393 614 aa5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 HOXA1P49639 335 aaPredicted RBP5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 DVL1P1P54792 670 aaPredicted RBP5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 CDONQ4KMG0 1287 aa5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 OR7E24Q6IFN5 339 aa5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 FAM171BQ6P995 826 aa5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 TSSK4Q6SA08 328 aa5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 MMABQ96EY8 250 aaPredicted RBP5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 DUX3Q96PT4 197 aa5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 NEURL2Q9BR09 285 aa5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 ZNF696Q9H7X3 374 aa5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 UBN1Q9NPG3 1134 aa5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 SCRT2Q9NQ03 307 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms