RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 FKBPLQ9UIM3 349 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SH3BGRL2Q9UJC5 107 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 LEF1Q9UJU2 399 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SERTAD3Q9UJW9 196 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 AGO1Q9UL18 857 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ANKRD6Q9Y2G4 727 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 KMT2BQ9UMN6 2715 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ZSCAN5CA6NGD5 496 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ANKDD1BA6NHY2 528 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 GMFGO60234 142 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 NUDT1P36639 197 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 PRSS12P56730 875 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 MRPS25P82663 173 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 DLX2Q07687 328 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 MRPL58Q14197 206 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 TSC22D1Q15714 1073 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ZSCAN26Q16670 478 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 KLHL38Q2WGJ6 581 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 SLC10A6Q3KNW5 377 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 PARP15Q460N3 678 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 MINDY4Q4G0A6 757 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 C16orf87Q6PH81 154 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 BNIPLQ7Z465 357 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 DRAXINQ8NBI3 349 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 OR2T34Q8NGX1 318 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 FAM174AQ8TBP5 190 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 FCRL3Q96P31 734 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 KCNK16Q96T55 309 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 CMKLR1Q99788 373 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 SPATA9Q9BWV2 254 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ULBP3Q9BZM4 244 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 PABPC3Q9H361 631 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 FZD8Q9H461 694 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 GPATCH2LQ9NWQ4 482 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 NDUFA13Q9P0J0 144 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 DNAJC16Q9Y2G8 782 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 KIF26AQ9ULI4 1882 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 C1orf232A0A0U1RR37 186 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ESYT3A0FGR9 886 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 TK2O00142 265 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ARHGAP33O14559 1287 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 PJA2O43164 708 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 CDC40O60508 579 aaKnown RBP eCLIP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 LSM8O95777 96 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 GLP2RO95838 553 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ALPPP05187 535 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 MYF5P13349 255 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 BMP1P13497 986 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 CD38P28907 300 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 SERPINB3P29508 390 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 HSPA9P38646 679 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 CD86P42081 329 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ARCN1P48444 511 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 OLR1P78380 273 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 KCNC4Q03721 635 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 MLC1Q15049 377 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 KRT31Q15323 416 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 CARTPTQ16568 116 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 DEFB109BQ30KR1 87 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 CACHD1Q5VU97 1274 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 TTI2Q6NXR4 508 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 R3HCC1LQ7Z5L2 792 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ARHGEF19Q8IW93 802 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ADGRG2Q8IZP9 1017 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ZFPM2Q8WW38 1151 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF606Q8WXB4 792 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 RXFP2Q8WXD0 754 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ZSWIM3Q96MP5 696 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 PANX3Q96QZ0 392 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 USB1Q9BQ65 265 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 CNOT10Q9H9A5 744 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 CCDC177Q9NQR7 707 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 CNGB3Q9NQW8 809 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 THSD1Q9NS62 852 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 BAIAP2L1Q9UHR4 511 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 RABGEF1Q9UJ41 708 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 CDH22Q9UJ99 828 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 CHMP2BQ9UQN3 213 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 PCDHA13Q9Y5I0 950 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 GRIN2DO15399 1336 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 FAM149AA5PLN7 773 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 A8MVJ9 347 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ZBTB14O43829 449 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 GPR37L1O60883 481 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 KLHL18O94889 574 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ACSL3O95573 720 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 TBX18O95935 607 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 HLA-DQA2P01906 255 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ADRB2P07550 413 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 TFPIP10646 304 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 CPA3P15088 417 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 IDSP22304 550 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ITPKBP27987 946 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 EIF1AXP47813 144 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ITGA8P53708 1063 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ADGRE1Q14246 886 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 BMT2Q1RMZ1 405 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 FAM83EQ2M2I3 478 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 SMU1Q2TAY7 513 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 PRUNE1Q86TP1 453 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms