RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 NAA30Q147X3 362 aaPredicted RBP9.03□□□□□ -0.96
CAST-220ENST00000508117 TMCO4Q5TGY1 634 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 TAF3Q5VWG9 929 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 CPZQ66K79 652 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 SLC6A19Q695T7 634 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 DOK6Q6PKX4 331 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 PRSS42Q7Z5A4 293 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 PHLDB2Q86SQ0 1253 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 NOP9Q86U38 636 aaKnown RBP9.03□□□□□ -0.96
CAST-220ENST00000508117 BPHLQ86WA6 291 aaPredicted RBP9.03□□□□□ -0.96
CAST-220ENST00000508117 PPP1R3BQ86XI6 285 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 ZNF677Q86XU0 584 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 CT55Q8WUE5 264 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 NSMCE3Q96MG7 304 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 EIF3CQ99613 913 aaKnown RBP9.03□□□□□ -0.96
CAST-220ENST00000508117 BARD1Q99728 777 aaKnown RBP9.03□□□□□ -0.96
CAST-220ENST00000508117 SLC39A8Q9C0K1 460 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 RMI1Q9H9A7 625 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 TMEM63CQ9P1W3 806 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 CPNE7Q9UBL6 633 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 CNOT8Q9UFF9 292 aaKnown RBP9.03□□□□□ -0.96
CAST-220ENST00000508117 TBC1D29Q9UFV1 150 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 LNPEPQ9UIQ6 1025 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 FZD10Q9ULW2 581 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 TMEM98Q9Y2Y6 226 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 PPIL1Q9Y3C6 166 aa9.03□□□□□ -0.96
CAST-220ENST00000508117 HEATR9A2RTY3 570 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 GOLGA6CA6NDK9 693 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 GOLGA6BA6NDN3 693 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 NPIPB15A6NHN6 443 aaPredicted RBP9.02□□□□□ -0.97
CAST-220ENST00000508117 J3QL48 77 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 DNAJC6O75061 913 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 CPP00450 1065 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 MMEP08473 750 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 GOLGA6DP0CG33 693 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 KRT3P12035 628 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 PRF1P14222 555 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 GPD1P21695 349 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 HSPA9P38646 679 aaKnown RBP9.02□□□□□ -0.97
CAST-220ENST00000508117 MAPK9P45984 424 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 CCL11P51671 97 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 GFERP55789 205 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 ITGA1P56199 1179 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 RPS15P62841 145 aaKnown RBP9.02□□□□□ -0.97
CAST-220ENST00000508117 UBE2IP63279 158 aaKnown RBP9.02□□□□□ -0.97
CAST-220ENST00000508117 SH3BP2P78314 561 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 IL10RBQ08334 325 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 NR6A1Q15406 480 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 RALGPS1Q5JS13 557 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 DENND2CQ68D51 928 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 ZNF517Q6ZMY9 492 aaPredicted RBP9.02□□□□□ -0.97
CAST-220ENST00000508117 TP53INP2Q8IXH6 220 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 RBMXL3Q8N7X1 1067 aaKnown RBP9.02□□□□□ -0.97
CAST-220ENST00000508117 EXD1Q8NHP7 514 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 ADAMTS17Q8TE56 1095 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 EPS8L1Q8TE68 723 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 PDCD6IPQ8WUM4 868 aaKnown RBP9.02□□□□□ -0.97
CAST-220ENST00000508117 KLHL6Q8WZ60 621 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 AP2M1Q96CW1 435 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 SNRNP40Q96DI7 357 aaKnown RBP9.02□□□□□ -0.97
CAST-220ENST00000508117 ZNF599Q96NL3 588 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 SMAD5Q99717 465 aaKnown RBP9.02□□□□□ -0.97
CAST-220ENST00000508117 TBC1D10AQ9BXI6 508 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 NAA15Q9BXJ9 866 aaKnown RBP9.02□□□□□ -0.97
CAST-220ENST00000508117 RAB33BQ9H082 229 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 ABCG8Q9H221 673 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 RUBCNLQ9H714 662 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 GDPD2Q9HCC8 539 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 GOLGA6AQ9NYA3 693 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 OGFRQ9NZT2 677 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 SEMA5BQ9P283 1151 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 C5AR2Q9P296 337 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 EPHA6Q9UF33 1036 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 G3BP2Q9UN86 482 aaKnown RBP9.02□□□□□ -0.97
CAST-220ENST00000508117 MED13LQ71F56 2210 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 MTORP42345 2549 aa9.02□□□□□ -0.97
CAST-220ENST00000508117 GOLGA6L4A6NEF3 574 aa9.01□□□□□ -0.97
CAST-220ENST00000508117 ANKUB1A6NFN9 424 aa9.01□□□□□ -0.97
CAST-220ENST00000508117 ARGFXA6NJG6 315 aa9.01□□□□□ -0.97
CAST-220ENST00000508117 UBXN7O94888 489 aa9.01□□□□□ -0.97
CAST-220ENST00000508117 ZNF30P17039 623 aa9.01□□□□□ -0.97
CAST-220ENST00000508117 NELFEP18615 380 aaKnown RBP9.01□□□□□ -0.97
CAST-220ENST00000508117 XRCC1P18887 633 aaPredicted RBP9.01□□□□□ -0.97
CAST-220ENST00000508117 ZNF143P52747 638 aaPredicted RBP9.01□□□□□ -0.97
CAST-220ENST00000508117 TPI1P60174 286 aa9.01□□□□□ -0.97
CAST-220ENST00000508117 PTP4A2Q12974 167 aa9.01□□□□□ -0.97
CAST-220ENST00000508117 IL10RAQ13651 578 aa9.01□□□□□ -0.97
CAST-220ENST00000508117 KLHDC7AQ5VTJ3 777 aa9.01□□□□□ -0.97
CAST-220ENST00000508117 IZUMO3Q5VZ72 239 aa9.01□□□□□ -0.97
CAST-220ENST00000508117 WDR59Q6PJI9 974 aa9.01□□□□□ -0.97
CAST-220ENST00000508117 TMEM26Q6ZUK4 368 aa9.01□□□□□ -0.97
CAST-220ENST00000508117 USP45Q70EL2 814 aa9.01□□□□□ -0.97
CAST-220ENST00000508117 MARK2Q7KZI7 788 aaKnown RBP9.01□□□□□ -0.97
CAST-220ENST00000508117 ARHGAP12Q8IWW6 846 aa9.01□□□□□ -0.97
CAST-220ENST00000508117 IQCKQ8N0W5 287 aa9.01□□□□□ -0.97
CAST-220ENST00000508117 AOPEPQ8N6M6 819 aa9.01□□□□□ -0.97
CAST-220ENST00000508117 GLIS1Q8NBF1 620 aa9.01□□□□□ -0.97
CAST-220ENST00000508117 FDCSPQ8NFU4 85 aa9.01□□□□□ -0.97
CAST-220ENST00000508117 C19orf60Q96EN9 201 aa9.01□□□□□ -0.97
CAST-220ENST00000508117 CELF6Q96J87 481 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms