RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 PRPF4BQ13523 1007 aaKnown RBP4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 BAATQ14032 418 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 DHX34Q14147 1143 aaKnown RBP4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 OASLQ15646 514 aaKnown RBP4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 HLFQ16534 295 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 IGSF11Q5DX21 431 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 KCNT1Q5JUK3 1230 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 KRT79Q5XKE5 535 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 ZNF280DQ6N043 979 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 RGMBQ6NW40 437 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 C9orf47Q6ZRZ4 202 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 AACSQ86V21 672 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 FBXL14Q8N1E6 418 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 CLIP4Q8N3C7 705 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 AVL9Q8NBF6 648 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 MCUQ8NE86 351 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 GSDMBQ8TAX9 411 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 DNAAF4Q8WXU2 420 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 GCNAQ96QF7 691 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 OR1F2PQ96R84 312 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 FIZ1Q96SL8 496 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 CSF3RQ99062 836 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 CMKLR1Q99788 373 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 APOL6Q9BWW8 343 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 MRPL1Q9BYD6 325 aaKnown RBP4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 TXLNGYQ9BZA5 131 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 DNAJC18Q9H819 358 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 PCDH9Q9HC56 1237 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 MCM9Q9NXL9 1143 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 MARCH4Q9P2E8 410 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 PADI1Q9ULC6 663 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 PPIEQ9UNP9 301 aaKnown RBP4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 NFS1Q9Y697 457 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 RPS6KL1Q9Y6S9 549 aa4.03□□□□□ -1.76
HMGB1P28-201ENST00000507778 EIF5BO60841 1220 aaKnown RBP4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 RSL1D1O76021 490 aaKnown RBP4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 GH2P01242 217 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 TRIM21P19474 475 aaKnown RBP4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 UGT1A1P22309 533 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 ITGB8P26012 769 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 POLGP54098 1239 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 TMF1P82094 1093 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 PDE1BQ01064 536 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 CXCL9Q07325 125 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 TNFAIP1Q13829 316 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 CALCRLQ16602 461 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 MYLK3Q32MK0 819 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 C18orf63Q68DL7 685 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 LCN10Q6JVE6 187 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 SLC30A6Q6NXT4 461 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 FAM122CQ6P4D5 195 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 PAPD4Q6PIY7 484 aaKnown RBP4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 BRAT1Q6PJG6 821 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 GPR180Q86V85 440 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 NRROSQ86YC3 692 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 RASGEF1CQ8N431 466 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 MINDY1Q8N5J2 469 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 EMC1Q8N766 993 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 OR2AK2Q8NG84 335 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 B4GALNT2Q8NHY0 566 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 HMGCLL1Q8TB92 370 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 SCARB1Q8WTV0 552 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 MIB2Q96AX9 1013 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 PHF21BQ96EK2 531 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 C3orf30Q96M34 536 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 CEP295NLQ96MC4 621 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 DACH2Q96NX9 599 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 ABHD1Q96SE0 405 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 MTERF1Q99551 399 aaKnown RBP4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 SEMA3CQ99985 751 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 SEZ6LQ9BYH1 1024 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 SPRY4Q9C004 299 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 KLHL4Q9C0H6 718 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 SLC35C2Q9NQQ7 365 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 WNT16Q9UBV4 365 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 FBXL2Q9UKC9 423 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 KLHL20Q9Y2M5 609 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 FAM169AQ9Y6X4 670 aa4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.02□□□□□ -1.77
HMGB1P28-201ENST00000507778 IGLV5-37A0A075B6J1 123 aa4.01□□□□□ -1.77
HMGB1P28-201ENST00000507778 LNP1A1A4G5 178 aa4.01□□□□□ -1.77
HMGB1P28-201ENST00000507778 FAM90A26D6RGX4 464 aa4.01□□□□□ -1.77
HMGB1P28-201ENST00000507778 ANKRD28O15084 1053 aa4.01□□□□□ -1.77
HMGB1P28-201ENST00000507778 PLPP2O43688 288 aa4.01□□□□□ -1.77
HMGB1P28-201ENST00000507778 RFPL2O75678 378 aa4.01□□□□□ -1.77
HMGB1P28-201ENST00000507778 DDNO94850 711 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P28-201ENST00000507778 CLDN14O95500 239 aa4.01□□□□□ -1.77
HMGB1P28-201ENST00000507778 TPOP07202 933 aa4.01□□□□□ -1.77
HMGB1P28-201ENST00000507778 LIG4P49917 911 aa4.01□□□□□ -1.77
HMGB1P28-201ENST00000507778 ARSEP51690 589 aa4.01□□□□□ -1.77
HMGB1P28-201ENST00000507778 LINC00205P59089 165 aa4.01□□□□□ -1.77
HMGB1P28-201ENST00000507778 EGR4Q05215 589 aa4.01□□□□□ -1.77
HMGB1P28-201ENST00000507778 SPOCK1Q08629 439 aa4.01□□□□□ -1.77
HMGB1P28-201ENST00000507778 ZNF155Q12901 538 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P28-201ENST00000507778 GRAPQ13588 217 aa4.01□□□□□ -1.77
HMGB1P28-201ENST00000507778 RASA2Q15283 850 aa4.01□□□□□ -1.77
HMGB1P28-201ENST00000507778 TMEM266Q2M3C6 531 aa4.01□□□□□ -1.77
HMGB1P28-201ENST00000507778 PDXDC1Q6P996 788 aa4.01□□□□□ -1.77
HMGB1P28-201ENST00000507778 RHBDF2Q6PJF5 856 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms