RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 VEGFDO43915 354 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 PRAMEF10O60809 474 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 KCNJ13O60928 360 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 SLC25A14O95258 325 aaPredicted RBP14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 THRAP10827 490 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 F3P13726 295 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 ITIH1P19827 911 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 C16orf72Q14CZ0 275 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 IYDQ6PHW0 289 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 WDR74Q6RFH5 385 aaPredicted RBP14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 SARM1Q6SZW1 724 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 CHST15Q7LFX5 561 aaPredicted RBP14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 ZNF605Q86T29 641 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 TRIM74Q86UV6 250 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 DTX1Q86Y01 620 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 SFTPA2Q8IWL1 248 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 CCDC170Q8IYT3 715 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 RNF25Q96BH1 459 aaPredicted RBP14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 MED8Q96G25 268 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 RBM41Q96IZ5 413 aaKnown RBP14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 CCDC74BQ96LY2 380 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 TEKT5Q96M29 485 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 AGAP3Q96P47 875 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 PLEKHG4BQ96PX9 1271 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 WDR24Q96S15 920 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 ZPBPQ9BS86 351 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 SPATA16Q9BXB7 569 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 UCK1Q9HA47 277 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 GLOD4Q9HC38 313 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 SCN8AQ9UQD0 1980 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 ZNF711Q9Y462 761 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 FADS2P1A8MWK0 482 aa14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 HACD1B0YJ81 288 aa14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 CAPN5O15484 640 aaPredicted RBP14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 ZRANB2O95218 330 aaKnown RBP eCLIP14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 VCLP18206 1134 aa14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 COMTP21964 271 aa14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 CYLC1P35663 651 aaPredicted RBP14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 MAGEA1P43355 309 aa14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 NOP2P46087 812 aaKnown RBP14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 PPM1FP49593 454 aaPredicted RBP14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 GALNT3Q14435 633 aa14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 SPA17Q15506 151 aa14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 TAZQ16635 292 aa14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 TFDP3Q5H9I0 405 aa14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 ZNF574Q6ZN55 896 aaPredicted RBP14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 RCOR2Q8IZ40 523 aa14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 ZNF843Q8N446 348 aa14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 BRSK1Q8TDC3 778 aa14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 PTCD2Q8WV60 388 aaKnown RBP14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 PATE1Q8WXA2 126 aa14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 P3H4Q92791 437 aa14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 GLYATL1Q969I3 302 aa14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 VPS35Q96QK1 796 aa14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 SMIM14Q96QK8 99 aa14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 FAM153AQ9UHL3 310 aa14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 ST14Q9Y5Y6 855 aa14.27□□□□□ -0.13
HMGCS1-203ENST00000507004 ZFC3H1O60293 1989 aaKnown RBP14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 A0A0U1RQS6 177 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 LILRA5A6NI73 299 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 C9orf172C9J069 976 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 CHUKO15111 745 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 KMOO15229 486 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 EFSO43281 561 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 CST8O60676 142 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 PPFIA2O75334 1257 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 C1QL1O75973 258 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 IPO7O95373 1038 aaKnown RBP14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 ATP1A1P05023 1023 aaKnown RBP14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 ACP5P13686 325 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 HMGCLP35914 325 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 ETV5P41161 510 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 CDKN2BP42772 138 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 TBX2Q13207 712 aaPredicted RBP14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 PRKD1Q15139 912 aaPredicted RBP14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 DCAF12Q5T6F0 453 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 PCSK4Q6UW60 755 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 MFSD7Q6UXD7 560 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 TMPRSS9Q7Z410 1059 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 LRRTM4Q86VH4 590 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 PLXDC1Q8IUK5 500 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 RBM12BQ8IXT5 1001 aaKnown RBP14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 KATNAL2Q8IYT4 538 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 TIMM29Q9BSF4 260 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 EFHD1Q9BUP0 239 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 ZCCHC2Q9C0B9 1178 aaKnown RBP14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 WDR70Q9NW82 654 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 ATXN10Q9UBB4 475 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 TRHDEQ9UKU6 1024 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 PLEKHM1Q9Y4G2 1056 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 ALG6Q9Y672 507 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 OAS3Q9Y6K5 1087 aaKnown RBP14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 BPTFQ12830 3046 aa14.26□□□□□ -0.13
HMGCS1-203ENST00000507004 A6NCN8 305 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 LCA5LO95447 670 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 HLA-DPA1P20036 260 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 PTPN3P26045 913 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 CETN2P41208 172 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 COPS2P61201 443 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms