RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 CRTAMO95727 393 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 ZNF8P17098 575 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 UGT1A6P19224 532 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 SPINK2P20155 84 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 UGT1A1P22309 533 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 UGT1A4P22310 534 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 UGT1A3P35503 534 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 UGT1A5P35504 534 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 DAB2P98082 770 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 XIAPP98170 497 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 CTBSQ01459 385 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 CERCAMQ5T4B2 595 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 CCDC137Q6PK04 289 aaKnown RBP18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 CREG2Q8IUH2 290 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 DNAJC1Q96KC8 554 aaKnown RBP18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 CAPZA3Q96KX2 299 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 CNTNAP3BQ96NU0 1288 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 CNTNAP3Q9BZ76 1288 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 OR2AG1Q9H205 316 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 UGT1A7Q9HAW7 530 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 UGT1A10Q9HAW8 530 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 UGT1A8Q9HAW9 530 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 CASS4Q9NQ75 786 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 EIF2B3Q9NR50 452 aaKnown RBP18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 SIRPGQ9P1W8 387 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 GPR34Q9UPC5 381 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 DOLKQ9UPQ8 538 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 GPSM3Q9Y4H4 160 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 PCDHGA1Q9Y5H4 931 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 PTPRBP23467 1997 aa18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 CTAGE9A4FU28 777 aa18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 NUAK1O60285 661 aa18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 PRAMEF1O95521 474 aa18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 LMAN1P49257 510 aa18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 VPS41P49754 854 aa18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 BASP1P80723 227 aaKnown RBP18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 TMPRSS15P98073 1019 aa18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 CDH17Q12864 832 aa18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 PEX6Q13608 980 aa18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 SEPT6Q14141 434 aa18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 GUSBP11Q6P575 273 aa18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 DHRS13Q6UX07 377 aa18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 C4orf22Q6V702 233 aa18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 PPP1R21Q6ZMI0 780 aa18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 GALNT13Q8IUC8 556 aa18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 GSDMCQ9BYG8 508 aa18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 TRIM39Q9HCM9 518 aa18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 SPATS2LQ9NUQ6 558 aaKnown RBP18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 SAR1BQ9Y6B6 198 aa18.05■□□□□ 0.48
PDLIM7-216ENST00000506537 ZFC3H1O60293 1989 aaKnown RBP18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 ARHGEF17Q96PE2 2063 aaPredicted RBP18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 GOLGA6L10A0A0M3HER8 536 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 TCRBV7S3A2A0A539 114 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 MROH6A6NGR9 719 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 NOBOXO60393 691 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 TRIM16O95361 564 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 KRT14P02533 472 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 FNTAP49354 379 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 CLDN6P56747 220 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 PDE1BQ01064 536 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 ILF3Q12906 894 aaKnown RBP eCLIP18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 NR0B2Q15466 257 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 CCDC38Q502W7 563 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 SLC30A9Q6PML9 568 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 ZNF534Q76KX8 674 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 ARL10Q8N8L6 244 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 DNAAF3Q8N9W5 541 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 FAM46DQ8NEK8 389 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 DDHD1Q8NEL9 900 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 SCG3Q8WXD2 468 aaKnown RBP18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 C19orf43Q9BQ61 176 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 RMI1Q9H9A7 625 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 NLE1Q9NVX2 485 aaPredicted RBP18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 SMOXQ9NWM0 555 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 TAAR2Q9P1P5 351 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 ZNHIT2Q9UHR6 403 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 KLK13Q9UKR3 277 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 FRYQ5TBA9 3013 aa18.04■□□□□ 0.48
PDLIM7-216ENST00000506537 CCDC78A2IDD5 438 aa18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 B4DGG1 531 aa18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 CHUKO15111 745 aa18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 SRP72O76094 671 aaKnown RBP18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 PSMA3P25788 255 aa18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 TERF1P54274 439 aa18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 SHC2P98077 582 aa18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 GPS1Q13098 491 aa18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 ILKQ13418 452 aa18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 ITGA9Q13797 1035 aa18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 KCNJ11Q14654 390 aa18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 PERM1Q5SV97 790 aa18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 GPRC6AQ5T6X5 926 aa18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 OGFOD3Q6PK18 319 aa18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 ZNF547Q8IVP9 402 aa18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 GPR156Q8NFN8 814 aa18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 IFI44Q8TCB0 444 aa18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 ZNF398Q8TD17 642 aa18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 CCDC97Q96F63 343 aaPredicted RBP18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 SCNM1Q9BWG6 230 aa18.03■□□□□ 0.48
PDLIM7-216ENST00000506537 DDX47Q9H0S4 455 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms