RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), human

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GYPB-205	ENST00000505583	ARL4A	P40617	200 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	CASR	P41180	1078 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	GARS	P41250	739 aa	Known RBP	5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	PRKCI	P41743	596 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	MAPK9	P45984	424 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	PPM1F	P49593	454 aa	Predicted RBP	5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	ZNF135	P52742	658 aa	Predicted RBP	5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	CDH6	P55285	790 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	GFER	P55789	205 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	GPLD1	P80108	840 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	HHEX	Q03014	270 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	ITK	Q08881	620 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	GALNT2	Q10471	571 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	CDC20	Q12834	499 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	UBAP2L	Q14157	1087 aa	Known RBP	5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	STX1A	Q16623	288 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	DEFB109B	Q30KR1	87 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	BOLA3	Q53S33	107 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	RALGPS1	Q5JS13	557 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	HENMT1	Q5T8I9	393 aa	Known RBP	5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	HGSNAT	Q68CP4	663 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	NCBP2-AS2	Q69YL0	99 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	HIST2H2BC	Q6DN03	193 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	ALG1L	Q6GMV1	187 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	WDR74	Q6RFH5	385 aa	Predicted RBP	5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	SASS6	Q6UVJ0	657 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	CLEC17A	Q6ZS10	378 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	ZNF765	Q7L2R6	523 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	TMEM135	Q86UB9	458 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	NLRP8	Q86W28	1048 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	GALNT13	Q8IUC8	556 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	NLGN4X	Q8N0W4	816 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	CCDC112	Q8NEF3	446 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	ANKRD20A12P	Q8NF67	263 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	OR10G6	Q8NH81	332 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	EXD1	Q8NHP7	514 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	FAM71B	Q8TC56	605 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	NCSTN	Q92542	709 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	MAML1	Q92585	1016 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	AHCYL2	Q96HN2	611 aa	Known RBP	5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	PLEKHG4B	Q96PX9	1271 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	TDRD1	Q9BXT4	1180 aa	Known RBP	5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	THAP2	Q9H0W7	228 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	GPN2	Q9H9Y4	310 aa	Predicted RBP	5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	SARS2	Q9NP81	518 aa	Known RBP	5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	PRDM8	Q9NQV8	689 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	FBXO8	Q9NRD0	319 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	ANO10	Q9NW15	660 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	SIDT1	Q9NXL6	827 aa	Known RBP	5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	KCTD5	Q9NXV2	234 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	SCHIP1	Q9P0W5	487 aa	Predicted RBP	5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	ATXN10	Q9UBB4	475 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	SLC23A2	Q9UGH3	650 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	TUBD1	Q9UJT1	453 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	MYO6	Q9UM54	1294 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	TMEM184B	Q9Y519	407 aa	Predicted RBP	5.79	□□□□□ -1.48
GYPB-205	ENST00000505583	SLC30A1	Q9Y6M5	507 aa		5.79	□□□□□ -1.48
GYPB-205	ENST00000505583		A0A087X0T9	212 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	PRR19	A6NJB7	356 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	ZW10	O43264	779 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	KIF1C	O43896	1103 aa	Known RBP	5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	PDGFA	P04085	211 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	PIRT	P0C851	137 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	FAM228B	P0C875	321 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	F3	P13726	295 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	ZNF30	P17039	623 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	ZNF8	P17098	575 aa	Predicted RBP	5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	TYRP1	P17643	537 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	MAP4	P27816	1152 aa	Known RBP	5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	STAT5A	P42229	794 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	LEPR	P48357	1165 aa	Known RBP	5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	SPINT3	P49223	89 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	MMP16	P51512	607 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	MLLT10	P55197	1068 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	RAB15	P59190	212 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	TAS2R40	P59535	323 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	PPP1CA	P62136	330 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	UBE2I	P63279	158 aa	Known RBP	5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	SH3BP2	P78314	561 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	GBE1	Q04446	702 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	TYRO3	Q06418	890 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	KLHL30	Q0D2K2	578 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	SLC10A2	Q12908	348 aa	Predicted RBP	5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	LRP8	Q14114	963 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	DPYSL3	Q14195	570 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	GALNT3	Q14435	633 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	PAFAH1B3	Q15102	231 aa	Known RBP	5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	KHDC1	Q4VXA5	237 aa	Known RBP	5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	C16orf46	Q6P387	395 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	LYSMD3	Q7Z3D4	306 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	LURAP1L	Q8IV03	231 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	PQLC3	Q8N755	202 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	CNTD1	Q8N815	330 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	NIPA2	Q8N8Q9	360 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	LPCAT1	Q8NF37	534 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	C9orf43	Q8TAL5	461 aa	Predicted RBP	5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	TEKT4	Q8WW24	435 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	STARD8	Q92502	1023 aa		5.78	□□□□□ -1.48
GYPB-205	ENST00000505583	CATSPER2	Q96P56	530 aa		5.78	□□□□□ -1.48

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