RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 SQSTM1Q13501 440 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 DBN1Q16643 649 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 KCTD19Q17RG1 926 aaPredicted RBP8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 SKIDA1Q1XH10 827 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 ZNF549Q6P9A3 640 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 OR13H1Q8NG92 308 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 GSDMBQ8TAX9 411 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 WRAP53Q9BUR4 548 aaKnown RBP8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 BFARQ9NZS9 450 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 MARCH4Q9P2E8 410 aaPredicted RBP8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 TPP1O14773 563 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 BCAT2O15382 392 aaPredicted RBP8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 PTPRCAPQ14761 206 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 ALG11Q2TAA5 492 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 ABCA7Q8IZY2 2146 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 CACTIN-AS1Q8N1I8 211 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 SLC25A41Q8N5S1 370 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 SAP25Q8TEE9 199 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 MFSD3Q96ES6 412 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 FAM153BP0C7A2 387 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 ERGP11308 486 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 H2AFXP16104 143 aaPredicted RBP8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 CTBSQ01459 385 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 INPP5AQ14642 412 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 STAT4Q14765 748 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 FAM153CQ494X1 144 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 SYCP2LQ5T4T6 812 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 LVRNQ6Q4G3 990 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 MICALCLQ6ZW33 695 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 RYBPQ8N488 228 aaPredicted RBP8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 OR4L1Q8NH43 312 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 TTC25Q96NG3 672 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 APOL2Q9BQE5 337 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 MENTQ9BUN1 341 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 ACSS3Q9H6R3 686 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 CCDC189A1A4V9 331 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 BANF1O75531 89 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 FAM193AP78312 1265 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 PTK2BQ14289 1009 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 POU6F1Q14863 301 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 RNF187Q5TA31 235 aaPredicted RBP8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 IL27RAQ6UWB1 636 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 NEK10Q6ZWH5 1172 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 RASGEF1AQ8N9B8 481 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 MYRIPQ8NFW9 859 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 TRIM56Q9BRZ2 755 aaKnown RBP8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 CLPBQ9H078 707 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 TRNAU1APQ9NX07 287 aaKnown RBP8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 A0A0C4DFX4 3053 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 FPGTO14772 594 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 GPC4O75487 556 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 TPH1P17752 444 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 MAGEA4P43358 317 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 CLCN7P51798 805 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 VSNL1P62760 191 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 LRP8Q14114 963 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 POM121L1PQ3SYA9 428 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 TIFABQ6ZNK6 161 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 FBXO36Q8NEA4 188 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 SCAMP4Q969E2 229 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 AP2M1Q96CW1 435 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 RMDN1Q96DB5 314 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 CERS2Q96G23 380 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 PDLIM5Q96HC4 596 aaKnown RBP8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 ATXN10Q9UBB4 475 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 ANKRD6Q9Y2G4 727 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 NCOR1O75376 2440 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 PI4KAP42356 2102 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 TBC1D3DA0A087WVF3 549 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 TBC1D3IA0A087WXS9 549 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 TBC1D3EA0A087X179 549 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 TBC1D3KA0A087X1G2 549 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 TCRBV9S1A1TA0A576 114 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 SLC5A10A0PJK1 596 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 TBC1D3FA6NER0 549 aaPredicted RBP8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 TBC1D3LB9A6J9 549 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 MAGEC1O60732 1142 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 NDUFS2O75306 463 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 PRAMEF1O95521 474 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 POLBP06746 335 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 TBC1D3HP0C7X1 549 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 CDKN1CP49918 316 aaPredicted RBP8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 TBC1D3GQ6DHY5 549 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 TBC1D3CQ6IPX1 549 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 TMEFF1Q8IYR6 380 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 TBC1D3Q8IZP1 549 aaPredicted RBP8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 PDIK1LQ8N165 341 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 FBXO15Q8NCQ5 510 aaPredicted RBP8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 ANKRD7Q92527 254 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 FAM167BQ9BTA0 163 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 PKP3Q9Y446 797 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 PRSS38A1L453 326 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 TMEM202A6NGA9 273 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 H0Y8X5 98 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 RIPK2O43353 540 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 SLCO2B1O94956 709 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 PIRTP0C851 137 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 FDXRP22570 491 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms