RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 CD68P34810 354 aaPredicted RBP13.03□□□□□ -0.32
DDX41-204ENST00000504807 CASRP41180 1078 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 ACTR1BP42025 376 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 CDKN2BP42772 138 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 SPINT3P49223 89 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 EPHB1P54762 984 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 ACTR1AP61163 376 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 ILF3Q12906 894 aaKnown RBP eCLIP13.03□□□□□ -0.32
DDX41-204ENST00000504807 TRIM14Q14142 442 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 TAZQ16635 292 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 KHDC1Q4VXA5 237 aaKnown RBP13.03□□□□□ -0.32
DDX41-204ENST00000504807 ZFAND4Q86XD8 727 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 TC2NQ8N9U0 490 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 GPR26Q8NDV2 337 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 AGAP3Q96P47 875 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 OR2M4Q96R27 311 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 GSDMCQ9BYG8 508 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 DEF6Q9H4E7 631 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 AMACRQ9UHK6 382 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 PCDHGA4Q9Y5G9 962 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 ADGRG1Q9Y653 693 aa13.03□□□□□ -0.32
DDX41-204ENST00000504807 SETD2Q9BYW2 2564 aaPredicted RBP13.02□□□□□ -0.32
DDX41-204ENST00000504807 IGHV5-10-1A0A0J9YXX1 117 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 RCCD1A6NED2 376 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 ZNF487B1APH4 448 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 ANKRD66B4E2M5 251 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 F5H423 210 aaPredicted RBP13.02□□□□□ -0.33
DDX41-204ENST00000504807 PDE2AO00408 941 aaPredicted RBP13.02□□□□□ -0.33
DDX41-204ENST00000504807 CBFA2T2O43439 604 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 ZNF30P17039 623 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 MX2P20592 715 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 ALDH4A1P30038 563 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 AP1B1Q10567 949 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 WASHC5Q12768 1159 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 TCEAL1Q15170 157 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 PCSK7Q16549 785 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 TSR1Q2NL82 804 aaKnown RBP13.02□□□□□ -0.33
DDX41-204ENST00000504807 ZFYVE27Q5T4F4 411 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 ALS2CLQ60I27 953 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 MICALCLQ6ZW33 695 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 VASH2Q86V25 355 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 NLRP8Q86W28 1048 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 JAMLQ86YT9 394 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 RFX6Q8HWS3 928 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 MAP7D3Q8IWC1 876 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 OR6C4Q8NGE1 309 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 SLC37A2Q8TED4 501 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 CCDC74BQ96LY2 380 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 CCDC42Q96M95 316 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 C10orf88Q9H8K7 445 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 UBP1Q9NZI7 540 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 SEPT10Q9P0V9 454 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 TBC1D29Q9UFV1 150 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 SHOC2Q9UQ13 582 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 KCNK6Q9Y257 313 aa13.02□□□□□ -0.33
DDX41-204ENST00000504807 IGHV1OR21-1A0A087WYE8 117 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 APOL1O14791 398 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 GPR39O43194 453 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 PTPN3P26045 913 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 ARHGAP25P42331 645 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 RPL26P61254 145 aaKnown RBP13.01□□□□□ -0.33
DDX41-204ENST00000504807 PRKD1Q15139 912 aaPredicted RBP13.01□□□□□ -0.33
DDX41-204ENST00000504807 MAP9Q49MG5 647 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.01□□□□□ -0.33
DDX41-204ENST00000504807 PHF19Q5T6S3 580 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 LRRC38Q5VT99 294 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 NRSN1Q8IZ57 195 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 EXD1Q8NHP7 514 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 KIAA1524Q8TCG1 905 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 HTR3CQ8WXA8 447 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 KRT35Q92764 455 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 USP7Q93009 1102 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 TMEM74Q96NL1 305 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 GORASP1Q9BQQ3 440 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 MLPHQ9BV36 600 aaPredicted RBP13.01□□□□□ -0.33
DDX41-204ENST00000504807 SCHIP1Q9P0W5 487 aaPredicted RBP13.01□□□□□ -0.33
DDX41-204ENST00000504807 ATXN10Q9UBB4 475 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 SLC23A2Q9UGH3 650 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 RPL26L1Q9UNX3 145 aaKnown RBP13.01□□□□□ -0.33
DDX41-204ENST00000504807 PCDHGA7Q9Y5G6 932 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 CACNA1DQ01668 2161 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 CELSR2Q9HCU4 2923 aa13.01□□□□□ -0.33
DDX41-204ENST00000504807 RHPN2P1A8MT19 583 aa13□□□□□ -0.33
DDX41-204ENST00000504807 AKR1B15C9JRZ8 316 aaPredicted RBP13□□□□□ -0.33
DDX41-204ENST00000504807 MTX2O75431 263 aa13□□□□□ -0.33
DDX41-204ENST00000504807 SLC4A1P02730 911 aa13□□□□□ -0.33
DDX41-204ENST00000504807 TPM3P06753 285 aa13□□□□□ -0.33
DDX41-204ENST00000504807 FGF3P11487 239 aaPredicted RBP13□□□□□ -0.33
DDX41-204ENST00000504807 ACP5P13686 325 aa13□□□□□ -0.33
DDX41-204ENST00000504807 ZNF8P17098 575 aaPredicted RBP13□□□□□ -0.33
DDX41-204ENST00000504807 CES1P23141 567 aa13□□□□□ -0.33
DDX41-204ENST00000504807 MLLT3P42568 568 aaPredicted RBP13□□□□□ -0.33
DDX41-204ENST00000504807 CHRNA4P43681 627 aa13□□□□□ -0.33
DDX41-204ENST00000504807 MAPK10P53779 464 aa13□□□□□ -0.33
DDX41-204ENST00000504807 ZNF787Q6DD87 383 aa13□□□□□ -0.33
DDX41-204ENST00000504807 KDELC1Q6UW63 502 aa13□□□□□ -0.33
DDX41-204ENST00000504807 SPOCD1Q6ZMY3 1216 aa13□□□□□ -0.33
DDX41-204ENST00000504807 CHST15Q7LFX5 561 aaPredicted RBP13□□□□□ -0.33
DDX41-204ENST00000504807 TMC3Q7Z5M5 1100 aa13□□□□□ -0.33
DDX41-204ENST00000504807 VSIG1Q86XK7 387 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms