RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 D6RAR5 112 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 NTN3O00634 580 aaPredicted RBP14.11□□□□□ -0.15
HOXC9-202ENST00000504557 GPR39O43194 453 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 GRID2O43424 1007 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 KRT86O43790 486 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 DNAJC6O75061 913 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 TCEA3O75764 348 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 ANXA9O76027 345 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 ZNF8P17098 575 aaPredicted RBP14.11□□□□□ -0.15
HOXC9-202ENST00000504557 ACTN2P35609 894 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 PDX1P52945 283 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 PRPSAP1Q14558 356 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 COL28A1Q2UY09 1125 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 MAP9Q49MG5 647 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 PHF19Q5T6S3 580 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 FAM151BQ6UXP7 276 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 USP53Q70EK8 1073 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 SPRED1Q7Z699 444 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 PHYKPLQ8IUZ5 450 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 NAGSQ8N159 534 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 TRAM1L1Q8N609 369 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 FAM71DQ8N9W8 422 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 WDR48Q8TAF3 677 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 GLYATL1Q969I3 302 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 GORASP1Q9BQQ3 440 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 ZSCAN5AQ9BUG6 496 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 TSGA10Q9BZW7 698 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 POLR1BQ9H9Y6 1135 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 RAD18Q9NS91 495 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 VPS18Q9P253 973 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 LHX6Q9UPM6 363 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 DNAJC16Q9Y2G8 782 aa14.11□□□□□ -0.15
HOXC9-202ENST00000504557 R3HDM2Q9Y2K5 976 aaKnown RBP14.11□□□□□ -0.15
HOXC9-202ENST00000504557 ZZEF1O43149 2961 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 A0A1W2PNU3 283 aaPredicted RBP14.1□□□□□ -0.15
HOXC9-202ENST00000504557 NUDT21O43809 227 aaKnown RBP14.1□□□□□ -0.15
HOXC9-202ENST00000504557 EML2O95834 649 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 HGFP14210 728 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 HLA-DPA1P20036 260 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 ITPKBP27987 946 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 RBMS1P29558 406 aaKnown RBP14.1□□□□□ -0.15
HOXC9-202ENST00000504557 EIF2S3P41091 472 aaKnown RBP14.1□□□□□ -0.15
HOXC9-202ENST00000504557 DCDC1P59894 354 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 SEPT7Q16181 437 aaKnown RBP14.1□□□□□ -0.15
HOXC9-202ENST00000504557 INSCQ1MX18 579 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 TBC1D25Q3MII6 688 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 ATP13A5Q4VNC0 1218 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 SEL1L2Q5TEA6 688 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 NKAIN2Q5VXU1 208 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 LRRC69Q6ZNQ3 347 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 ARHGEF18Q6ZSZ5 1173 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 ADGRG6Q86SQ4 1221 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 RAVER1Q8IY67 606 aaKnown RBP14.1□□□□□ -0.15
HOXC9-202ENST00000504557 TTC30BQ8N4P2 665 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 ATG4AQ8WYN0 398 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 FGF11Q92914 225 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 SCARF2Q96GP6 870 aaPredicted RBP14.1□□□□□ -0.15
HOXC9-202ENST00000504557 CRELD1Q96HD1 420 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 SPATA13Q96N96 652 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 SRPK1Q96SB4 655 aaKnown RBP14.1□□□□□ -0.15
HOXC9-202ENST00000504557 TMEM121Q9BTD3 319 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 KLC4Q9NSK0 619 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 PKP3Q9Y446 797 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 ARL5AQ9Y689 179 aa14.1□□□□□ -0.15
HOXC9-202ENST00000504557 CCDC187A0A096LP49 1063 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 PPM1DO15297 605 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 STX7O15400 261 aaKnown RBP14.09□□□□□ -0.15
HOXC9-202ENST00000504557 RRP8O43159 456 aaKnown RBP14.09□□□□□ -0.15
HOXC9-202ENST00000504557 ARHGAP6O43182 974 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 NUAK1O60285 661 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 UGT1A9O60656 530 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 UGT1A6P19224 532 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 UGT1A1P22309 533 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 UGT1A4P22310 534 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 UGT1A3P35503 534 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 UGT1A5P35504 534 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 SPAM1P38567 509 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 MAPK9P45984 424 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 LSSP48449 732 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 INHBCP55103 352 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 TMPRSS15P98073 1019 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 NFATC2Q13469 925 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 PEX6Q13608 980 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 CHRNA6Q15825 494 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 KHDC1Q4VXA5 237 aaKnown RBP14.09□□□□□ -0.15
HOXC9-202ENST00000504557 TMPRSS9Q7Z410 1059 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 JAMLQ86YT9 394 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 RNF10Q8N5U6 811 aaKnown RBP14.09□□□□□ -0.15
HOXC9-202ENST00000504557 TTC13Q8NBP0 860 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 WDR36Q8NI36 951 aaKnown RBP14.09□□□□□ -0.15
HOXC9-202ENST00000504557 SLC37A2Q8TED4 501 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 HES6Q96HZ4 224 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 TBL1YQ9BQ87 522 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 STRADBQ9C0K7 418 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 TRABDQ9H4I3 376 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 UGT1A7Q9HAW7 530 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 UGT1A10Q9HAW8 530 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 UGT1A8Q9HAW9 530 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 TRIM39Q9HCM9 518 aa14.09□□□□□ -0.15
HOXC9-202ENST00000504557 HACD3Q9P035 362 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms