RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 CTF1Q16619 201 aa5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 FRG2Q64ET8 278 aa5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 RHBDF2Q6PJF5 856 aa5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 SARM1Q6SZW1 724 aa5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 SEPT14Q6ZU15 432 aa5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 CACNA2D4Q7Z3S7 1137 aa5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 RND1Q92730 232 aa5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 HARBI1Q96MB7 349 aa5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 ZNF385AQ96PM9 386 aaKnown RBP5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 CSF3RQ99062 836 aa5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 TREX2Q9BQ50 279 aaPredicted RBP5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 PCGF1Q9BSM1 259 aa5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 C6orf106Q9H6K1 298 aaPredicted RBP5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 RANGRFQ9HD47 186 aaPredicted RBP5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 SMARCAL1Q9NZC9 954 aa5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 ZNF224Q9NZL3 707 aa5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 SNX9Q9Y5X1 595 aa5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 LYVE1Q9Y5Y7 322 aa5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 RPGRIP1LQ68CZ1 1315 aa5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 EIF3AQ14152 1382 aaKnown RBP5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 NEXMIFQ5QGS0 1516 aa5.87□□□□□ -1.47
UBE2D3-217ENST00000504211 BRD4O60885 1362 aaPredicted RBP5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 INSRP06213 1382 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 PARD3Q8TEW0 1356 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 A8MZ25 164 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 NDUFS3O75489 264 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 CLDN14O95500 239 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 ZBTB11O95625 1053 aaPredicted RBP5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 LINC00271P0C7V0 271 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 MAPK4P31152 587 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 CLCNKAP51800 687 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 ZNF155Q12901 538 aaPredicted RBP5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 ADIPOQQ15848 244 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 ASIC2Q16515 512 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 SIGIRRQ6IA17 410 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 WDR73Q6P4I2 378 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 SLC36A4Q6YBV0 504 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 CCNI2Q6ZMN8 369 aaPredicted RBP5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 ARMC9Q7Z3E5 817 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 OR2AK2Q8NG84 335 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 OR14L1PQ8NHC6 308 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 LILRB1Q8NHL6 650 aaPredicted RBP5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 SPATA22Q8NHS9 363 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 USP6NLQ92738 828 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 ADGRG7Q96K78 797 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 SLC28A3Q9HAS3 691 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 HCFC1R1Q9NWW0 138 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 SIX4Q9UIU6 781 aa5.86□□□□□ -1.47
UBE2D3-217ENST00000504211 ADGRB1O14514 1584 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 ZFYVE9O95405 1425 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 DISP3Q9P2K9 1392 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 ZBED9Q6R2W3 1325 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 BTBD18B2RXH4 712 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 ACOT8O14734 319 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 MID1O15344 667 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 DDNO94850 711 aaPredicted RBP5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 KDM4BO94953 1096 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 PMS2P2O95744 297 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 SNTA1Q13424 505 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 TNFAIP1Q13829 316 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 KIF19Q2TAC6 998 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 CCDC184Q52MB2 194 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 HYIQ5T013 277 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 GLDNQ6ZMI3 551 aaPredicted RBP5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.85□□□□□ -1.474e-6■■■□□ 19.2
UBE2D3-217ENST00000504211 KRBA2Q6ZNG9 492 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 C4orf50Q6ZRC1 276 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 RNF168Q8IYW5 571 aaPredicted RBP5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 PDILTQ8N807 584 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 POMGNT1Q8WZA1 660 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 TANKQ92844 425 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 FAM84BQ96KN1 310 aaPredicted RBP5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 C1orf74Q96LT6 269 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 SEPT5Q99719 369 aaPredicted RBP5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 CHCHD6Q9BRQ6 235 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 DDX31Q9H8H2 851 aaKnown RBP5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 ACSS1Q9NUB1 689 aaPredicted RBP5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 ZNF580Q9UK33 172 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 ACSL5Q9ULC5 683 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 CORO1CQ9ULV4 474 aaPredicted RBP5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 USP32Q8NFA0 1604 aa5.85□□□□□ -1.47
UBE2D3-217ENST00000504211 ARHGEF40Q8TER5 1519 aa5.84□□□□□ -1.47
UBE2D3-217ENST00000504211 PIK3C2GO75747 1445 aa5.84□□□□□ -1.47
UBE2D3-217ENST00000504211 LRPPRCP42704 1394 aaKnown RBP5.84□□□□□ -1.47
UBE2D3-217ENST00000504211 PTP4A3O75365 173 aa5.84□□□□□ -1.47
UBE2D3-217ENST00000504211 DAB1O75553 588 aa5.84□□□□□ -1.47
UBE2D3-217ENST00000504211 JRKO75564 520 aa5.84□□□□□ -1.47
UBE2D3-217ENST00000504211 TIPRLO75663 272 aa5.84□□□□□ -1.47
UBE2D3-217ENST00000504211 UBA1P22314 1058 aaKnown RBP5.84□□□□□ -1.47
UBE2D3-217ENST00000504211 BDKRB2P30411 391 aa5.84□□□□□ -1.47
UBE2D3-217ENST00000504211 CLCN3P51790 818 aa5.84□□□□□ -1.47
UBE2D3-217ENST00000504211 EIF5P55010 431 aaKnown RBP5.84□□□□□ -1.47
UBE2D3-217ENST00000504211 ARF3P61204 181 aaPredicted RBP5.84□□□□□ -1.47
UBE2D3-217ENST00000504211 CSNK2A1P68400 391 aaPredicted RBP5.84□□□□□ -1.47
UBE2D3-217ENST00000504211 ARF1P84077 181 aaKnown RBP5.84□□□□□ -1.47
UBE2D3-217ENST00000504211 PRSS57Q6UWY2 283 aa5.84□□□□□ -1.47
UBE2D3-217ENST00000504211 IKBIPQ70UQ0 350 aa5.84□□□□□ -1.47
UBE2D3-217ENST00000504211 RBMXL3Q8N7X1 1067 aaKnown RBP5.84□□□□□ -1.47
UBE2D3-217ENST00000504211 CSNK2A3Q8NEV1 391 aa5.84□□□□□ -1.47
UBE2D3-217ENST00000504211 BICD1Q96G01 975 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms