RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 LRRC43Q8N309 656 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 DCLK2Q8N568 766 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 ESX1Q8N693 406 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZNF713Q8N859 430 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZNF441Q8N8Z8 693 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 ANKRD42Q8N9B4 389 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 USP38Q8NB14 1042 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 XXYLT1Q8NBI6 393 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 CCDC148Q8NFR7 591 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 TNIP2Q8NFZ5 429 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 OR4N2Q8NGD1 307 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 OR13A1Q8NGR1 328 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 FAM81AQ8TBF8 368 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 GRAPLQ8TC17 118 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZFAND2BQ8WV99 257 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 ANKRD7Q92527 254 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 FIG4Q92562 907 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 SDCCAG3Q96C92 435 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 RNF183Q96D59 192 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 THOC1Q96FV9 657 aaKnown RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 SNF8Q96H20 258 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 C1orf74Q96LT6 269 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 CEP295NLQ96MC4 621 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 CGREF1Q99674 301 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 MYD88Q99836 296 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 DESI2Q9BSY9 194 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 OSBPL10Q9BXB5 764 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 AP1M1Q9BXS5 423 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 MOV10L1Q9BXT6 1211 aaKnown RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 STMN4Q9H169 189 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 TNMDQ9H2S6 317 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 SMARCAD1Q9H4L7 1026 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 C8orf33Q9H7E9 229 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 PRDM8Q9NQV8 689 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 BATF3Q9NR55 127 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 CHST12Q9NRB3 414 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZFP57Q9NU63 452 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 THAP1Q9NVV9 213 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 NKIRAS2Q9NYR9 191 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 UBAP1Q9NZ09 502 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 VPS18Q9P253 973 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 WDR35Q9P2L0 1181 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 MBD2Q9UBB5 411 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 EXTL2Q9UBQ6 330 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 SIX4Q9UIU6 781 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 CCPG1Q9ULG6 757 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 PRELID1Q9Y255 219 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 CAB39Q9Y376 341 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 RRP7AQ9Y3A4 280 aaKnown RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 C2CD2Q9Y426 696 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 SNX8Q9Y5X2 465 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 SH3TC1Q8TE82 1336 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 MAPK8IP3Q9UPT6 1336 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 CCNB3Q8WWL7 1395 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 PLEKHG2Q9H7P9 1386 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 PPIP5K1Q6PFW1 1433 aa2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 RRBP1Q9P2E9 1410 aaKnown RBP2.05□□□□□ -2.08
HMGB3P17-201ENST00000504195 SMCHD1A6NHR9 2005 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 C17orf100A8MU93 164 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 C16orf97H3BN30 126 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 J3KR12 359 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 CETN3O15182 167 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 BIRC5O15392 142 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 SPOPO43791 374 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZBTB14O43829 449 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 IDH3BO43837 385 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ROCK2O75116 1388 aaKnown RBP2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 DDHD2O94830 711 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 CLDN14O95500 239 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 METTL18O95568 372 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 OLFM2O95897 454 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 PAHP00439 452 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZFYP08048 801 aaPredicted RBP2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 RPSAP08865 295 aaKnown RBP2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 LINC00271P0C7V0 271 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ACP5P13686 325 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 TNNT1P13805 278 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ATP6V1B1P15313 513 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 CTPS1P17812 591 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 POLR2EP19388 210 aaKnown RBP2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ELF1P32519 619 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ADD2P35612 726 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 GJC1P36383 396 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 PNPLA4P41247 253 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 RXRGP48443 463 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 CLCN3P51790 818 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 LIMK1P53667 647 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 PNLIPRP1P54315 467 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 EVCP57679 992 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 CBX1P83916 185 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 MECOMQ03112 1051 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 GOLGA8FQ08AF8 430 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 IL13RA2Q14627 380 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 MAPRE2Q15555 327 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 KIF7Q2M1P5 1343 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 CCDC57Q2TAC2 916 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 AP5B1Q2VPB7 878 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 LRRC24Q50LG9 513 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 MAP3K19Q56UN5 1328 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms