RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 IGHV1OR21-1A0A087WYE8 117 aa21.83■■□□□ 1.09
LSM6-203ENST00000503982 F5H423 210 aaPredicted RBP21.83■■□□□ 1.09
LSM6-203ENST00000503982 K7ENP7 123 aa21.83■■□□□ 1.09
LSM6-203ENST00000503982 GRID2O43424 1007 aa21.83■■□□□ 1.09
LSM6-203ENST00000503982 PSTPIP1O43586 416 aa21.83■■□□□ 1.09
LSM6-203ENST00000503982 DNAJC6O75061 913 aa21.83■■□□□ 1.09
LSM6-203ENST00000503982 SLC2A4P14672 509 aa21.83■■□□□ 1.09
LSM6-203ENST00000503982 CSTF2P33240 577 aaKnown RBP eCLIP21.83■■□□□ 1.09
LSM6-203ENST00000503982 CYLC1P35663 651 aaPredicted RBP21.83■■□□□ 1.09
LSM6-203ENST00000503982 HHEXQ03014 270 aa21.83■■□□□ 1.09
LSM6-203ENST00000503982 NFATC2Q13469 925 aa21.83■■□□□ 1.09
LSM6-203ENST00000503982 NR1D2Q14995 579 aa21.83■■□□□ 1.09
LSM6-203ENST00000503982 CLPPQ16740 277 aaPredicted RBP21.83■■□□□ 1.09
LSM6-203ENST00000503982 PLA2G4EQ3MJ16 856 aa21.83■■□□□ 1.09
LSM6-203ENST00000503982 SNAP47Q5SQN1 464 aa21.83■■□□□ 1.09
LSM6-203ENST00000503982 MANEAQ5SRI9 462 aa21.83■■□□□ 1.09
LSM6-203ENST00000503982 ZNF648Q5T619 568 aaPredicted RBP21.83■■□□□ 1.09
LSM6-203ENST00000503982 INO80CQ6PI98 192 aaPredicted RBP21.83■■□□□ 1.09
LSM6-203ENST00000503982 ZC3H18Q86VM9 953 aaKnown RBP21.83■■□□□ 1.09
LSM6-203ENST00000503982 ZFAND4Q86XD8 727 aa21.83■■□□□ 1.09
LSM6-203ENST00000503982 OR10G6Q8NH81 332 aa21.83■■□□□ 1.09
LSM6-203ENST00000503982 P3H4Q92791 437 aa21.83■■□□□ 1.09
LSM6-203ENST00000503982 GOLPH3Q9H4A6 298 aa21.83■■□□□ 1.09
LSM6-203ENST00000503982 KLHL8Q9P2G9 620 aaPredicted RBP21.83■■□□□ 1.09
LSM6-203ENST00000503982 ALG6Q9Y672 507 aa21.83■■□□□ 1.09
LSM6-203ENST00000503982 IGHV5-10-1A0A0J9YXX1 117 aa21.82■■□□□ 1.08
LSM6-203ENST00000503982 DUX1O43812 170 aa21.82■■□□□ 1.08
LSM6-203ENST00000503982 PTPN3P26045 913 aa21.82■■□□□ 1.08
LSM6-203ENST00000503982 CDKN2BP42772 138 aa21.82■■□□□ 1.08
LSM6-203ENST00000503982 NR2C2P49116 596 aa21.82■■□□□ 1.08
LSM6-203ENST00000503982 LIMK2P53671 638 aa21.82■■□□□ 1.08
LSM6-203ENST00000503982 CFHR1Q03591 330 aa21.82■■□□□ 1.08
LSM6-203ENST00000503982 CCDC181Q5TID7 509 aa21.82■■□□□ 1.08
LSM6-203ENST00000503982 CRTC3Q6UUV7 619 aa21.82■■□□□ 1.08
LSM6-203ENST00000503982 SLC9B2Q86UD5 537 aa21.82■■□□□ 1.08
LSM6-203ENST00000503982 PHYKPLQ8IUZ5 450 aa21.82■■□□□ 1.08
LSM6-203ENST00000503982 CCDC112Q8NEF3 446 aa21.82■■□□□ 1.08
LSM6-203ENST00000503982 BAG1Q99933 345 aaPredicted RBP21.82■■□□□ 1.08
LSM6-203ENST00000503982 DPYSL5Q9BPU6 564 aa21.82■■□□□ 1.08
LSM6-203ENST00000503982 ZSCAN5AQ9BUG6 496 aa21.82■■□□□ 1.08
LSM6-203ENST00000503982 CARD9Q9H257 536 aa21.82■■□□□ 1.08
LSM6-203ENST00000503982 MAGEE1Q9HCI5 957 aa21.82■■□□□ 1.08
LSM6-203ENST00000503982 FOXJ2Q9P0K8 574 aa21.82■■□□□ 1.08
LSM6-203ENST00000503982 ATXN10Q9UBB4 475 aa21.82■■□□□ 1.08
LSM6-203ENST00000503982 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.82■■□□□ 1.08
LSM6-203ENST00000503982 PCYT1BQ9Y5K3 369 aaPredicted RBP21.82■■□□□ 1.08
LSM6-203ENST00000503982 HGSO14964 777 aaPredicted RBP21.81■■□□□ 1.08
LSM6-203ENST00000503982 NDST3O95803 873 aa21.81■■□□□ 1.08
LSM6-203ENST00000503982 EML2O95834 649 aa21.81■■□□□ 1.08
LSM6-203ENST00000503982 CCL4P13236 92 aa21.81■■□□□ 1.08
LSM6-203ENST00000503982 PECAM1P16284 738 aaPredicted RBP21.81■■□□□ 1.08
LSM6-203ENST00000503982 NAP1L1P55209 391 aaKnown RBP21.81■■□□□ 1.08
LSM6-203ENST00000503982 GPLD1P80108 840 aa21.81■■□□□ 1.08
LSM6-203ENST00000503982 TRA2AQ13595 282 aaKnown RBP eCLIP21.81■■□□□ 1.08
LSM6-203ENST00000503982 INSCQ1MX18 579 aa21.81■■□□□ 1.08
LSM6-203ENST00000503982 TFDP3Q5H9I0 405 aa21.81■■□□□ 1.08
LSM6-203ENST00000503982 ZNF574Q6ZN55 896 aaPredicted RBP21.81■■□□□ 1.08
LSM6-203ENST00000503982 FAM129CQ86XR2 697 aa21.81■■□□□ 1.08
LSM6-203ENST00000503982 SFRP1Q8N474 314 aa21.81■■□□□ 1.08
LSM6-203ENST00000503982 TRAM1L1Q8N609 369 aa21.81■■□□□ 1.08
LSM6-203ENST00000503982 SPC24Q8NBT2 197 aa21.81■■□□□ 1.08
LSM6-203ENST00000503982 GPR26Q8NDV2 337 aa21.81■■□□□ 1.08
LSM6-203ENST00000503982 OR4D9Q8NGE8 314 aa21.81■■□□□ 1.08
LSM6-203ENST00000503982 GDAP1Q8TB36 358 aa21.81■■□□□ 1.08
LSM6-203ENST00000503982 TRIB3Q96RU7 358 aa21.81■■□□□ 1.08
LSM6-203ENST00000503982 BPIFA1Q9NP55 256 aa21.81■■□□□ 1.08
LSM6-203ENST00000503982 TBC1D29Q9UFV1 150 aa21.81■■□□□ 1.08
LSM6-203ENST00000503982 FAM153AQ9UHL3 310 aa21.81■■□□□ 1.08
LSM6-203ENST00000503982 TFR2Q9UP52 801 aa21.81■■□□□ 1.08
LSM6-203ENST00000503982 PCDHA13Q9Y5I0 950 aa21.81■■□□□ 1.08
LSM6-203ENST00000503982 FASNP49327 2511 aaKnown RBP21.81■■□□□ 1.08
LSM6-203ENST00000503982 A8MU76 341 aa21.8■■□□□ 1.08
LSM6-203ENST00000503982 C9orf172C9J069 976 aa21.8■■□□□ 1.08
LSM6-203ENST00000503982 NUAK1O60285 661 aa21.8■■□□□ 1.08
LSM6-203ENST00000503982 ZRANB2O95218 330 aaKnown RBP eCLIP21.8■■□□□ 1.08
LSM6-203ENST00000503982 NDUFA10O95299 355 aa21.8■■□□□ 1.08
LSM6-203ENST00000503982 ZNF8P17098 575 aaPredicted RBP21.8■■□□□ 1.08
LSM6-203ENST00000503982 NFKB1P19838 968 aa21.8■■□□□ 1.08
LSM6-203ENST00000503982 PRKD1Q15139 912 aaPredicted RBP21.8■■□□□ 1.08
LSM6-203ENST00000503982 PID1Q7Z2X4 250 aa21.8■■□□□ 1.08
LSM6-203ENST00000503982 TMC3Q7Z5M5 1100 aa21.8■■□□□ 1.08
LSM6-203ENST00000503982 DAAM2Q86T65 1068 aa21.8■■□□□ 1.08
LSM6-203ENST00000503982 AGBL5Q8NDL9 886 aa21.8■■□□□ 1.08
LSM6-203ENST00000503982 JPH3Q8WXH2 748 aaPredicted RBP21.8■■□□□ 1.08
LSM6-203ENST00000503982 NCSTNQ92542 709 aa21.8■■□□□ 1.08
LSM6-203ENST00000503982 SH3KBP1Q96B97 665 aa21.8■■□□□ 1.08
LSM6-203ENST00000503982 RBM41Q96IZ5 413 aaKnown RBP21.8■■□□□ 1.08
LSM6-203ENST00000503982 TEKT5Q96M29 485 aa21.8■■□□□ 1.08
LSM6-203ENST00000503982 SRPK1Q96SB4 655 aaKnown RBP21.8■■□□□ 1.08
LSM6-203ENST00000503982 HERPUD2Q9BSE4 406 aa21.8■■□□□ 1.08
LSM6-203ENST00000503982 KLC4Q9NSK0 619 aa21.8■■□□□ 1.08
LSM6-203ENST00000503982 TMEM9Q9P0T7 183 aa21.8■■□□□ 1.08
LSM6-203ENST00000503982 EPN1Q9Y6I3 576 aaPredicted RBP21.8■■□□□ 1.08
LSM6-203ENST00000503982 MGAQ8IWI9 3026 aa21.8■■□□□ 1.08
LSM6-203ENST00000503982 SOWAHDA6NJG2 315 aa21.79■■□□□ 1.08
LSM6-203ENST00000503982 MTSS1O43312 755 aa21.79■■□□□ 1.08
LSM6-203ENST00000503982 CSF2RBP32927 897 aa21.79■■□□□ 1.08
LSM6-203ENST00000503982 FASLGP48023 281 aa21.79■■□□□ 1.08
LSM6-203ENST00000503982 HADHBP55084 474 aaKnown RBP21.79■■□□□ 1.08
LSM6-203ENST00000503982 SRSF6Q13247 344 aaKnown RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms