RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 CLPBQ9H078 707 aa10.63□□□□□ -0.71
UBE2D3-212ENST00000502563 XAB2Q9HCS7 855 aaKnown RBP10.63□□□□□ -0.71
UBE2D3-212ENST00000502563 BFARQ9NZS9 450 aa10.63□□□□□ -0.71
UBE2D3-212ENST00000502563 FTSJ1Q9UET6 329 aa10.63□□□□□ -0.71
UBE2D3-212ENST00000502563 CD84Q9UIB8 345 aa10.63□□□□□ -0.71
UBE2D3-212ENST00000502563 SUFUQ9UMX1 484 aa10.63□□□□□ -0.71
UBE2D3-212ENST00000502563 MAGEB16A2A368 324 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 PRR19A6NJB7 356 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 F5H423 210 aaPredicted RBP10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 QSOX1O00391 747 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 PRAMEF1O95521 474 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 LDOC1O95751 146 aaPredicted RBP10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 FUCA1P04066 466 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 ANXA6P08133 673 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 GSTM1P09488 218 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 CTSEP14091 401 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 HOXB3P14651 431 aaPredicted RBP10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 CKMT2P17540 419 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 ITGALP20701 1170 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 IVDP26440 423 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 PTGIRP43119 386 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 RPIAP49247 311 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 LMAN1P49257 510 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 DUSP3P51452 185 aaPredicted RBP10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 GSTM4Q03013 218 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 DMPKQ09013 629 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 ILF3Q12906 894 aaKnown RBP eCLIP10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 GPS1Q13098 491 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 OLIG2Q13516 323 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 PRAMEF14Q5SWL7 426 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 SYT10Q6XYQ8 523 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 CERS6Q6ZMG9 384 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 PPP1R21Q6ZMI0 780 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 GATAD2AQ86YP4 633 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 HID1Q8IV36 788 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 NAT8LQ8N9F0 302 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 AVL9Q8NBF6 648 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 SPATA4Q8NEY3 305 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 OR52K1Q8NGK4 314 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 WDR48Q8TAF3 677 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 ZNF398Q8TD17 642 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 SETD7Q8WTS6 366 aaKnown RBP10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 GLMNQ92990 594 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 CDKN2AIPNLQ96HQ2 116 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 LINC00615Q96LM1 132 aaPredicted RBP10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 OR2M4Q96R27 311 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 APOL2Q9BQE5 337 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 TIMM29Q9BSF4 260 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 KIFC1Q9BW19 673 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 DDX47Q9H0S4 455 aaKnown RBP10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 UCKL1Q9NWZ5 548 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 TOR4AQ9NXH8 423 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 APOBEC2Q9Y235 224 aaKnown RBP10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 BTBD3Q9Y2F9 522 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 TCAF1Q9Y4C2 921 aa10.62□□□□□ -0.71
UBE2D3-212ENST00000502563 EME2A4GXA9 379 aaPredicted RBP10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 FAM221BA6H8Z2 402 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 TRIM38O00635 465 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 YY2O15391 372 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 ACADVLP49748 655 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 SHC2P98077 582 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 DR1Q01658 176 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 CKAP4Q07065 602 aaKnown RBP10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 TMEM115Q12893 351 aaPredicted RBP10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 PDAP1Q13442 181 aaKnown RBP10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 SPARCL1Q14515 664 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 ITIH4Q14624 930 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 POU6F1Q14863 301 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 NR1D2Q14995 579 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 MORF4L2Q15014 288 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 PPP1R7Q15435 360 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 CHRNA6Q15825 494 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 PPM1JQ5JR12 505 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 TSTD2Q5T7W7 516 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 RNASEH2BQ5TBB1 312 aaKnown RBP10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 LYPLAL1Q5VWZ2 237 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 PSAPL1Q6NUJ1 521 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 WASH2PQ6VEQ5 465 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 PACS1Q6VY07 963 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 KDM7AQ6ZMT4 941 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 MAATS1Q7Z4T9 603 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 ADGRG6Q86SQ4 1221 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 GALNT13Q8IUC8 556 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 PPIL6Q8IXY8 311 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 RBFAQ8N0V3 343 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 NXPE1Q8N323 547 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 MPP5Q8N3R9 675 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 ARL10Q8N8L6 244 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 DEFB124Q8NES8 71 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 GPR156Q8NFN8 814 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 OR13C4Q8NGS5 318 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 OR13J1Q8NGT2 312 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 LMX1AQ8TE12 382 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 ADAMTS14Q8WXS8 1223 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 NAT6Q93015 286 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 TSACCQ96A04 125 aaPredicted RBP10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 CNDP2Q96KP4 475 aaKnown RBP10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 PHACTR1Q9C0D0 580 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 TMEM168Q9H0V1 697 aa10.61□□□□□ -0.71
UBE2D3-212ENST00000502563 TCEAL2Q9H3H9 227 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms