RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-218	ENST00000502357	SLC19A1	P41440	591 aa		12.5	□□□□□ -0.41
LMNA-218	ENST00000502357	UBE2H	P62256	183 aa		12.5	□□□□□ -0.41
LMNA-218	ENST00000502357	ZNF235	Q14590	738 aa		12.5	□□□□□ -0.41
LMNA-218	ENST00000502357	KIR2DS5	Q14953	304 aa		12.5	□□□□□ -0.41
LMNA-218	ENST00000502357	DPYSL2	Q16555	572 aa		12.5	□□□□□ -0.41
LMNA-218	ENST00000502357	PRR30	Q53SZ7	412 aa	Predicted RBP	12.5	□□□□□ -0.41
LMNA-218	ENST00000502357	PPP6R3	Q5H9R7	873 aa	Predicted RBP	12.5	□□□□□ -0.41
LMNA-218	ENST00000502357	ZNF787	Q6DD87	383 aa		12.5	□□□□□ -0.41
LMNA-218	ENST00000502357	DCUN1D2	Q6PH85	259 aa		12.5	□□□□□ -0.41
LMNA-218	ENST00000502357	USP45	Q70EL2	814 aa		12.5	□□□□□ -0.41
LMNA-218	ENST00000502357	APTX	Q7Z2E3	356 aa	Known RBP	12.5	□□□□□ -0.41
LMNA-218	ENST00000502357	TICAM1	Q8IUC6	712 aa		12.5	□□□□□ -0.41
LMNA-218	ENST00000502357	HERPUD2	Q9BSE4	406 aa		12.5	□□□□□ -0.41
LMNA-218	ENST00000502357	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	12.5	□□□□□ -0.41
LMNA-218	ENST00000502357	GOLGA6A	Q9NYA3	693 aa		12.5	□□□□□ -0.41
LMNA-218	ENST00000502357	DTL	Q9NZJ0	730 aa		12.5	□□□□□ -0.41
LMNA-218	ENST00000502357	SLC23A2	Q9UGH3	650 aa		12.5	□□□□□ -0.41
LMNA-218	ENST00000502357	ZNHIT2	Q9UHR6	403 aa		12.5	□□□□□ -0.41
LMNA-218	ENST00000502357	VPS4A	Q9UN37	437 aa		12.5	□□□□□ -0.41
LMNA-218	ENST00000502357	CDC14C	A4D256	554 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	DAPK3	O43293	454 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	NUAK1	O60285	661 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	CEACAM4	O75871	244 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	NDUFA10	O95299	355 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	ACP5	P13686	325 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	BRAF	P15056	766 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	IL4R	P24394	825 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	MAPK9	P45984	424 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	ZNF135	P52742	658 aa	Predicted RBP	12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	DNASE1L3	Q13609	305 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	IL11RA	Q14626	422 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	SYCP1	Q15431	976 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	CPZ	Q66K79	652 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	TXNRD3NB	Q6F5E7	133 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	TMEM26	Q6ZUK4	368 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	PRSS42	Q7Z5A4	293 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	PLXDC1	Q8IUK5	500 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	AOPEP	Q8N6M6	819 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	ARRDC2	Q8TBH0	407 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	ENOX1	Q8TC92	643 aa	Known RBP	12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	CT55	Q8WUE5	264 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	TCTN2	Q96GX1	697 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	OR6C1	Q96RD1	312 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	TDRD1	Q9BXT4	1180 aa	Known RBP	12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	BRD8	Q9H0E9	1235 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	LHX9	Q9NQ69	397 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	RCOR3	Q9P2K3	495 aa	Predicted RBP	12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	PCDHB3	Q9Y5E6	796 aa		12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	PCDHGA9	Q9Y5G4	932 aa	Known RBP	12.49	□□□□□ -0.41
LMNA-218	ENST00000502357	ANKRD62	A6NC57	917 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	OR5K4	A6NMS3	321 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	TTLL8	A6PVC2	850 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	TCP11X1	B4DZS4	312 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	CHUK	O15111	745 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	PYGL	P06737	847 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	ATP1A3	P13637	1013 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	ZNF8	P17098	575 aa	Predicted RBP	12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	DCT	P40126	519 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	MMP13	P45452	471 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	FOXM1	Q08050	763 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	NIPAL4	Q0D2K0	466 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	UGT8	Q16880	541 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	CT47A1	Q5JQC4	288 aa	Predicted RBP	12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	ZNF648	Q5T619	568 aa	Predicted RBP	12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	ZNF517	Q6ZMY9	492 aa	Predicted RBP	12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	PAF1	Q8N7H5	531 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	ADAMTS17	Q8TE56	1095 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	MAML1	Q92585	1016 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	RSC1A1	Q92681	617 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	CSPG4P5	Q96PW8	444 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	TWSG1	Q9GZX9	223 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	CARD9	Q9H257	536 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	ACTL8	Q9H568	366 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	RMI1	Q9H9A7	625 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	ATXN10	Q9UBB4	475 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	EPHA6	Q9UF33	1036 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	CNOT8	Q9UFF9	292 aa	Known RBP	12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	KCND3	Q9UK17	655 aa		12.48	□□□□□ -0.41
LMNA-218	ENST00000502357	PRRC2C	Q9Y520	2896 aa	Known RBP	12.48	□□□□□ -0.41
LMNA-218	ENST00000502357		A1L4Q6	167 aa		12.47	□□□□□ -0.41
LMNA-218	ENST00000502357	LRRC10B	A6NIK2	292 aa		12.47	□□□□□ -0.41
LMNA-218	ENST00000502357	ENO4	A6NNW6	628 aa		12.47	□□□□□ -0.41
LMNA-218	ENST00000502357	GRID2	O43424	1007 aa		12.47	□□□□□ -0.41
LMNA-218	ENST00000502357	KATNA1	O75449	491 aa		12.47	□□□□□ -0.41
LMNA-218	ENST00000502357	ASMTL	O95671	621 aa		12.47	□□□□□ -0.41
LMNA-218	ENST00000502357	LDLR	P01130	860 aa		12.47	□□□□□ -0.41
LMNA-218	ENST00000502357	MMP2	P08253	660 aa		12.47	□□□□□ -0.41
LMNA-218	ENST00000502357	TYRP1	P17643	537 aa		12.47	□□□□□ -0.41
LMNA-218	ENST00000502357	NELFE	P18615	380 aa	Known RBP	12.47	□□□□□ -0.41
LMNA-218	ENST00000502357	NFKBIA	P25963	317 aa		12.47	□□□□□ -0.41
LMNA-218	ENST00000502357	PCK1	P35558	622 aa		12.47	□□□□□ -0.41
LMNA-218	ENST00000502357	GARS	P41250	739 aa	Known RBP	12.47	□□□□□ -0.41
LMNA-218	ENST00000502357	SPINT3	P49223	89 aa		12.47	□□□□□ -0.41
LMNA-218	ENST00000502357	SEPHS1	P49903	392 aa		12.47	□□□□□ -0.41
LMNA-218	ENST00000502357	COPB1	P53618	953 aa	Known RBP	12.47	□□□□□ -0.41
LMNA-218	ENST00000502357	CDH6	P55285	790 aa		12.47	□□□□□ -0.41
LMNA-218	ENST00000502357	PPP1CA	P62136	330 aa		12.47	□□□□□ -0.41
LMNA-218	ENST00000502357	RPS18	P62269	152 aa	Known RBP	12.47	□□□□□ -0.41
LMNA-218	ENST00000502357	DSC2	Q02487	901 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms