RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 MYO1HQ8N1T3 1032 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 MINDY1Q8N5J2 469 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 ESAMQ96AP7 390 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 PPWD1Q96BP3 646 aaKnown RBP9.79□□□□□ -0.84
CLIP1-204ENST00000501271 NMD3Q96D46 503 aaKnown RBP9.79□□□□□ -0.84
CLIP1-204ENST00000501271 TEX37Q96LM6 180 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 HOPXQ9BPY8 73 aaPredicted RBP9.79□□□□□ -0.84
CLIP1-204ENST00000501271 NACA2Q9H009 215 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 RBM38Q9H0Z9 239 aaKnown RBP9.79□□□□□ -0.84
CLIP1-204ENST00000501271 BPIFA1Q9NP55 256 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 HACD3Q9P035 362 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 PCTPQ9UKL6 214 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 AGO1Q9UL18 857 aaKnown RBP9.79□□□□□ -0.84
CLIP1-204ENST00000501271 PCDHB7Q9Y5E2 793 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 GPR45Q9Y5Y3 372 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 ANAPC1Q9H1A4 1944 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 A0A1W2PQ45 241 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-204ENST00000501271 A0A1W2PQY0 241 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 ASPDHA6ND91 283 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 C2orf81A6NN90 581 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 COCHO43405 550 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 CRCPO75575 148 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 F11P03951 625 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 RHOCP08134 193 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 SPATA31D3P0C874 917 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 PRR35P0CG20 571 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 HSPA8P11142 646 aaKnown RBP9.78□□□□□ -0.84
CLIP1-204ENST00000501271 IDO1P14902 403 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 RPL17P18621 184 aaKnown RBP9.78□□□□□ -0.84
CLIP1-204ENST00000501271 PSMA3P25788 255 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 MC4RP32245 332 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 ZFP36L2P47974 494 aaKnown RBP9.78□□□□□ -0.84
CLIP1-204ENST00000501271 HK3P52790 923 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 TXNL4AP83876 142 aaKnown RBP9.78□□□□□ -0.84
CLIP1-204ENST00000501271 MTA1Q13330 715 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 LSAMPQ13449 338 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 BLOC1S3Q6QNY0 202 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 SCIMPQ6UWF3 145 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 SPATA31D4Q6ZUB0 917 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 ERMP1Q7Z2K6 904 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 CARM1Q86X55 608 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 SPPL2CQ8IUH8 684 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 EFHBQ8N7U6 833 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 DBF4BQ8NFT6 615 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 LRRC58Q96CX6 371 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 ZFRQ96KR1 1074 aaKnown RBP9.78□□□□□ -0.84
CLIP1-204ENST00000501271 ZNF512Q96ME7 567 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-204ENST00000501271 TCF12Q99081 682 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 GKN1Q9NS71 199 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 ARMC1Q9NVT9 282 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 NDUFA13Q9P0J0 144 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 RAI2Q9Y5P3 530 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 SYCE1LA8MT33 242 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 SOCS2O14508 198 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 STX16O14662 325 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 AKAP10O43572 662 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 KLK8O60259 260 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 STAMBPO95630 424 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 COL6A1P12109 1028 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 HSD17B1P14061 328 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 PKMP14618 531 aaKnown RBP9.78□□□□□ -0.84
CLIP1-204ENST00000501271 NELFEP18615 380 aaKnown RBP9.78□□□□□ -0.84
CLIP1-204ENST00000501271 UGT1A6P19224 532 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 LPOP22079 712 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-204ENST00000501271 CORO1AP31146 461 aaKnown RBP9.78□□□□□ -0.84
CLIP1-204ENST00000501271 CLCN2P51788 898 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 ARF5P84085 180 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 TRAF2Q12933 501 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 RPS6KA2Q15349 733 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 TCTN1Q2MV58 587 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 MYLK3Q32MK0 819 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 XKR7Q5GH72 579 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 IRAK1BP1Q5VVH5 260 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 OGFOD2Q6N063 350 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 PRMT9Q6P2P2 845 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 LINGO4Q6UY18 593 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 C16orf59Q7L2K0 433 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 NKAPQ8N5F7 415 aaKnown RBP9.78□□□□□ -0.84
CLIP1-204ENST00000501271 DCBLD1Q8N8Z6 715 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 ANKFN1Q8N957 763 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 OR2T11Q8NH01 316 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 CD200R1Q8TD46 325 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 EEF1AKMT1Q8WVE0 214 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 WBP2Q969T9 261 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 VPS33AQ96AX1 596 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 DGCR14Q96DF8 476 aaKnown RBP9.78□□□□□ -0.84
CLIP1-204ENST00000501271 TTPALQ9BTX7 342 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 EFHD1Q9BUP0 239 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 OSBPL11Q9BXB4 747 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 C1QTNF3Q9BXJ4 246 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 ELAC1Q9H777 363 aaKnown RBP9.78□□□□□ -0.84
CLIP1-204ENST00000501271 CCM2LQ9NUG4 571 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-204ENST00000501271 AURKCQ9UQB9 309 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 ARIH1Q9Y4X5 557 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-204ENST00000501271 SCN5AQ14524 2016 aa9.78□□□□□ -0.84
CLIP1-204ENST00000501271 ILVBLA1L0T0 632 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 ZNF840PA6NDX5 716 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 ANKRD66B4E2M5 251 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 PLOD2O00469 737 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 HTRA2O43464 458 aaPredicted RBP9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms