RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 ADGRG1Q9Y653 693 aa18.22■□□□□ 0.51
HOXD11-202ENST00000498438 A0A087WV48 116 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 PMS2P1A4D2B8 440 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 RHPN2P1A8MT19 583 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 ANXA9O76027 345 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 DXOO77932 396 aaKnown RBP18.21■□□□□ 0.51
HOXD11-202ENST00000498438 STK10O94804 968 aaKnown RBP18.21■□□□□ 0.51
HOXD11-202ENST00000498438 SLC25A14O95258 325 aaPredicted RBP18.21■□□□□ 0.51
HOXD11-202ENST00000498438 PSMB4P28070 264 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 HMGCLP35914 325 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 CHST15Q7LFX5 561 aaPredicted RBP18.21■□□□□ 0.51
HOXD11-202ENST00000498438 GLT6D1Q7Z4J2 308 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 ZNF438Q7Z4V0 828 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 PHYKPLQ8IUZ5 450 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 LSMEM2Q8N112 164 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 CCDC110Q8TBZ0 833 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 FGF11Q92914 225 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 GLYATL1Q969I3 302 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 HES6Q96HZ4 224 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 PLEKHG4BQ96PX9 1271 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 TSGA10Q9BZW7 698 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 CARD9Q9H257 536 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 RMI1Q9H9A7 625 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 EPB41L5Q9HCM4 733 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 HACD3Q9P035 362 aa18.21■□□□□ 0.51
HOXD11-202ENST00000498438 RALYQ9UKM9 306 aaKnown RBP18.21■□□□□ 0.51
HOXD11-202ENST00000498438 CCDC187A0A096LP49 1063 aa18.2■□□□□ 0.5
HOXD11-202ENST00000498438 GOLGA6L9A6NEM1 432 aa18.2■□□□□ 0.5
HOXD11-202ENST00000498438 GRID2O43424 1007 aa18.2■□□□□ 0.5
HOXD11-202ENST00000498438 NUAK1O60285 661 aa18.2■□□□□ 0.5
HOXD11-202ENST00000498438 AGTP01019 485 aa18.2■□□□□ 0.5
HOXD11-202ENST00000498438 ACP5P13686 325 aa18.2■□□□□ 0.5
HOXD11-202ENST00000498438 ZNF8P17098 575 aaPredicted RBP18.2■□□□□ 0.5
HOXD11-202ENST00000498438 EIF2S3P41091 472 aaKnown RBP18.2■□□□□ 0.5
HOXD11-202ENST00000498438 INHBCP55103 352 aa18.2■□□□□ 0.5
HOXD11-202ENST00000498438 B4GALNT1Q00973 533 aa18.2■□□□□ 0.5
HOXD11-202ENST00000498438 BIRC2Q13490 618 aa18.2■□□□□ 0.5
HOXD11-202ENST00000498438 OLIG2Q13516 323 aa18.2■□□□□ 0.5
HOXD11-202ENST00000498438 NR1D2Q14995 579 aa18.2■□□□□ 0.5
HOXD11-202ENST00000498438 COL28A1Q2UY09 1125 aa18.2■□□□□ 0.5
HOXD11-202ENST00000498438 FOXR1Q6PIV2 292 aa18.2■□□□□ 0.5
HOXD11-202ENST00000498438 RNF10Q8N5U6 811 aaKnown RBP18.2■□□□□ 0.5
HOXD11-202ENST00000498438 WDR36Q8NI36 951 aaKnown RBP18.2■□□□□ 0.5
HOXD11-202ENST00000498438 LIN37Q96GY3 246 aaPredicted RBP18.2■□□□□ 0.5
HOXD11-202ENST00000498438 ZNF578Q96N58 590 aaPredicted RBP18.2■□□□□ 0.5
HOXD11-202ENST00000498438 SPATA13Q96N96 652 aa18.2■□□□□ 0.5
HOXD11-202ENST00000498438 ASCL3Q9NQ33 180 aa18.2■□□□□ 0.5
HOXD11-202ENST00000498438 GUCA1BQ9UMX6 200 aa18.2■□□□□ 0.5
HOXD11-202ENST00000498438 LHX6Q9UPM6 363 aa18.2■□□□□ 0.5
HOXD11-202ENST00000498438 KCNK6Q9Y257 313 aa18.2■□□□□ 0.5
HOXD11-202ENST00000498438 ARHGAP6O43182 974 aa18.19■□□□□ 0.5
HOXD11-202ENST00000498438 MTX2O75431 263 aa18.19■□□□□ 0.5
HOXD11-202ENST00000498438 EML2O95834 649 aa18.19■□□□□ 0.5
HOXD11-202ENST00000498438 ALDH4A1P30038 563 aa18.19■□□□□ 0.5
HOXD11-202ENST00000498438 ADRA1AP35348 466 aa18.19■□□□□ 0.5
HOXD11-202ENST00000498438 OR1D5P58170 312 aa18.19■□□□□ 0.5
HOXD11-202ENST00000498438 KLF1Q13351 362 aaPredicted RBP18.19■□□□□ 0.5
HOXD11-202ENST00000498438 AMZ1Q400G9 498 aa18.19■□□□□ 0.5
HOXD11-202ENST00000498438 ATP13A5Q4VNC0 1218 aa18.19■□□□□ 0.5
HOXD11-202ENST00000498438 IGF2-ASQ6U949 168 aa18.19■□□□□ 0.5
HOXD11-202ENST00000498438 CRTC3Q6UUV7 619 aa18.19■□□□□ 0.5
HOXD11-202ENST00000498438 TMPRSS9Q7Z410 1059 aa18.19■□□□□ 0.5
HOXD11-202ENST00000498438 ADGRG6Q86SQ4 1221 aa18.19■□□□□ 0.5
HOXD11-202ENST00000498438 TTC13Q8NBP0 860 aa18.19■□□□□ 0.5
HOXD11-202ENST00000498438 PRR11Q96HE9 360 aaPredicted RBP18.19■□□□□ 0.5
HOXD11-202ENST00000498438 TMEM74Q96NL1 305 aa18.19■□□□□ 0.5
HOXD11-202ENST00000498438 TRIM39Q9HCM9 518 aa18.19■□□□□ 0.5
HOXD11-202ENST00000498438 IL17CQ9P0M4 197 aa18.19■□□□□ 0.5
HOXD11-202ENST00000498438 TMPRSS11EQ9UL52 423 aa18.19■□□□□ 0.5
HOXD11-202ENST00000498438 R3HDM2Q9Y2K5 976 aaKnown RBP18.19■□□□□ 0.5
HOXD11-202ENST00000498438 AAR2Q9Y312 384 aaKnown RBP18.19■□□□□ 0.5
HOXD11-202ENST00000498438 PCDHGA8Q9Y5G5 932 aa18.19■□□□□ 0.5
HOXD11-202ENST00000498438 NBEAQ8NFP9 2946 aa18.19■□□□□ 0.5
HOXD11-202ENST00000498438 TCRBV7S2A1N4TA0A589 114 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 GPR89AB7ZAQ6 455 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 PPM1DO15297 605 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 B4GAT1O43505 415 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 BUD23O43709 281 aaKnown RBP18.18■□□□□ 0.5
HOXD11-202ENST00000498438 KRT86O43790 486 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 ZNF189O75820 626 aaPredicted RBP18.18■□□□□ 0.5
HOXD11-202ENST00000498438 GPR89BP0CG08 455 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 RBMS1P29558 406 aaKnown RBP18.18■□□□□ 0.5
HOXD11-202ENST00000498438 CCKBRP32239 447 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 SPAM1P38567 509 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 PCBP4P57723 403 aaKnown RBP18.18■□□□□ 0.5
HOXD11-202ENST00000498438 ERVPABLB-1P60509 514 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 PRPSAP1Q14558 356 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 MAP9Q49MG5 647 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 KHDC1Q4VXA5 237 aaKnown RBP18.18■□□□□ 0.5
HOXD11-202ENST00000498438 ZDHHC20Q5W0Z9 365 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 SFRP1Q8N474 314 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 CCDC112Q8NEF3 446 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 SLC37A2Q8TED4 501 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 VPS35Q96QK1 796 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 APOL2Q9BQE5 337 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 STRADBQ9C0K7 418 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 IL26Q9NPH9 171 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 THSD1Q9NS62 852 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 TBC1D29Q9UFV1 150 aa18.18■□□□□ 0.5
HOXD11-202ENST00000498438 PKP3Q9Y446 797 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms