RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 PCYT1BQ9Y5K3 369 aaPredicted RBP8.4□□□□□ -1.06
HMGXB4-207ENST00000498212 LAMA5O15230 3695 aa8.4□□□□□ -1.07
HMGXB4-207ENST00000498212 CHD6Q8TD26 2715 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 TRBV23OR9-2A0A075B6M9 112 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 TEX51A0A1B0GUA7 166 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 EIF4E1BA6NMX2 242 aaKnown RBP8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 HACD1B0YJ81 288 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 APOC4-APOC2K7ER74 178 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 AGRPO00253 132 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 GRID2O43424 1007 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 NUAK1O60285 661 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 SLC25A14O95258 325 aaPredicted RBP8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 APOC2P02655 101 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 ACP5P13686 325 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 SLC2A4P14672 509 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 ITIH1P19827 911 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 NFKB1P19838 968 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 FECHP22830 423 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 CD1CP29017 333 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 CD68P34810 354 aaPredicted RBP8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 TNNT3P45378 269 aaPredicted RBP8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 FASLGP48023 281 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 NAP1L1P55209 391 aaKnown RBP8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 COPS2P61201 443 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 CLPPQ16740 277 aaPredicted RBP8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 PDPK2PQ6A1A2 396 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 BBS12Q6ZW61 710 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 USP53Q70EK8 1073 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 PHYKPLQ8IUZ5 450 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 ZNF567Q8N184 647 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 SFRP1Q8N474 314 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 TRAM1L1Q8N609 369 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 HTR3CQ8WXA8 447 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 BBC3Q96PG8 261 aaPredicted RBP8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 QKIQ96PU8 341 aaKnown RBP eCLIP8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 FCRL5Q96RD9 977 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 NUDT22Q9BRQ3 303 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 CARD9Q9H257 536 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 STN1Q9H668 368 aaKnown RBP8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 CPNE5Q9HCH3 593 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 ARFGAP3Q9NP61 516 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 KCNK4Q9NYG8 393 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 AKAP7Q9P0M2 348 aaPredicted RBP8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 ATXN10Q9UBB4 475 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 NFKBIL1Q9UBC1 381 aaPredicted RBP8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 KCNK6Q9Y257 313 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 PCDHGA7Q9Y5G6 932 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 EPN1Q9Y6I3 576 aaPredicted RBP8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 SDK2Q58EX2 2172 aa8.39□□□□□ -1.07
HMGXB4-207ENST00000498212 BPTFQ12830 3046 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 IGHV1OR21-1A0A087WYE8 117 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 LOC285095A0A1B0GVY8 99 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 CCDC66A2RUB6 948 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 RCCD1A6NED2 376 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 BTNL10A8MVZ5 291 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 GPR89AB7ZAQ6 455 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 F5H423 210 aaPredicted RBP8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 H7C0C1 242 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 HGSO14964 777 aaPredicted RBP8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 AURKAO14965 403 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 ATXN7O15265 892 aaPredicted RBP8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 NVLO15381 856 aaKnown RBP8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 EML2O95834 649 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 EPOP01588 193 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 GPR89BP0CG08 455 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 ZNF8P17098 575 aaPredicted RBP8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 BPIP17213 487 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 RBL1P28749 1068 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 CTNNA1P35221 906 aaKnown RBP8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 HMGCLP35914 325 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 ETV5P41161 510 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 ATP5OP48047 213 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 PPM1FP49593 454 aaPredicted RBP8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 LIMK2P53671 638 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 MAPK10P53779 464 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 WNT3AP56704 352 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 GPLD1P80108 840 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 HHEXQ03014 270 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 VAC14Q08AM6 782 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 CLN3Q13286 438 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 MPP3Q13368 585 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 XRCC4Q13426 336 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 TRA2AQ13595 282 aaKnown RBP eCLIP8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 C16orf72Q14CZ0 275 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 NOMO1Q15155 1222 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 ZNF648Q5T619 568 aaPredicted RBP8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 ARHGAP40Q5TG30 622 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 CCDC181Q5TID7 509 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 NKAIN2Q5VXU1 208 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 KDELC1Q6UW63 502 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 RAD9BQ6WBX8 426 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 ZNF574Q6ZN55 896 aaPredicted RBP8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 ADGRG6Q86SQ4 1221 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 SLC9B2Q86UD5 537 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 RCBTB1Q8NDN9 531 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 OR4D9Q8NGE8 314 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 SLC37A2Q8TED4 501 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 GLYATL1Q969I3 302 aa8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 AHCYL2Q96HN2 611 aaKnown RBP8.38□□□□□ -1.07
HMGXB4-207ENST00000498212 CCDC74BQ96LY2 380 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms