RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 STX10O60499 249 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 GAGE7O76087 117 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 SLU7O95391 586 aaKnown RBP4.9□□□□□ -1.63
SSR3-209ENST00000498205 GAGE12FP0CL80 117 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 GAGE12GP0CL81 117 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 GAGE12IP0CL82 117 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 FCGR1AP12314 374 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 DAOP14920 347 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 SRD5A1P18405 259 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 C21orf33P30042 268 aaPredicted RBP4.9□□□□□ -1.63
SSR3-209ENST00000498205 RPL3P39023 403 aaKnown RBP4.9□□□□□ -1.63
SSR3-209ENST00000498205 GABRB2P47870 512 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 HDAC4P56524 1084 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 RPP30P78346 268 aaKnown RBP4.9□□□□□ -1.63
SSR3-209ENST00000498205 GAGE1Q13065 139 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 GAGE4Q13068 117 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 KEAP1Q14145 624 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 MYBPC2Q14324 1141 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 CAMK4Q16566 473 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 HIST2H2ACQ16777 129 aaPredicted RBP4.9□□□□□ -1.63
SSR3-209ENST00000498205 JAKMIP3Q5VZ66 844 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 NADSYN1Q6IA69 706 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 FAM173BQ6P4H8 233 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 CRELD2Q6UXH1 353 aaPredicted RBP4.9□□□□□ -1.63
SSR3-209ENST00000498205 KIF6Q6ZMV9 814 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 C11orf57Q6ZUT1 292 aaPredicted RBP4.9□□□□□ -1.63
SSR3-209ENST00000498205 FJX1Q86VR8 437 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 SNAPC3Q92966 411 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 FAM84BQ96KN1 310 aaPredicted RBP4.9□□□□□ -1.63
SSR3-209ENST00000498205 LRFN5Q96NI6 719 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 KRT23Q9C075 422 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 GOLPH3LQ9H4A5 285 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 RNF41Q9H4P4 317 aaPredicted RBP4.9□□□□□ -1.63
SSR3-209ENST00000498205 CLK4Q9HAZ1 481 aaKnown RBP4.9□□□□□ -1.63
SSR3-209ENST00000498205 SMYD2Q9NRG4 433 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 MPP6Q9NZW5 540 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 ORC3Q9UBD5 711 aaPredicted RBP4.9□□□□□ -1.63
SSR3-209ENST00000498205 GTF2A1LQ9UNN4 478 aa4.9□□□□□ -1.63
SSR3-209ENST00000498205 BCL9LQ86UU0 1499 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 COL14A1Q05707 1796 aaKnown RBP4.89□□□□□ -1.63
SSR3-209ENST00000498205 BCORQ6W2J9 1755 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 NUP98P52948 1817 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 KLF18A0A0U1RQI7 1052 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 A0A0U1RQJ8 604 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 ANKRD18BA2A2Z9 1011 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 C4orf47A7E2U8 309 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 KRTAP29-1A8MX34 341 aaPredicted RBP4.89□□□□□ -1.63
SSR3-209ENST00000498205 NPHP1O15259 732 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 VNN2O95498 520 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 POLBP06746 335 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 FGF3P11487 239 aaPredicted RBP4.89□□□□□ -1.63
SSR3-209ENST00000498205 H2AFXP16104 143 aaPredicted RBP4.89□□□□□ -1.63
SSR3-209ENST00000498205 ZNF18P17022 549 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 CD72P21854 359 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 CNTFP26441 200 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 HOXA11P31270 313 aaPredicted RBP4.89□□□□□ -1.63
SSR3-209ENST00000498205 FMO4P31512 558 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 SYKP43405 635 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 PEX5P50542 639 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 METAP2P50579 478 aaKnown RBP eCLIP4.89□□□□□ -1.63
SSR3-209ENST00000498205 NDUFA8P51970 172 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 ART1P52961 327 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 RAD23BP54727 409 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 DSCR9P59020 149 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 TIMM10P62072 90 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 CTTNQ14247 550 aaKnown RBP4.89□□□□□ -1.63
SSR3-209ENST00000498205 VEPH1Q14D04 833 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 TPD52L1Q16890 204 aaPredicted RBP4.89□□□□□ -1.63
SSR3-209ENST00000498205 PARP10Q53GL7 1025 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 TMEM81Q6P7N7 255 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 CCDC129Q6ZRS4 1044 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 CREB3L2Q70SY1 520 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 LURAP1LQ8IV03 231 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 VSTM4Q8IW00 320 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 CCDC105Q8IYK2 499 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 KRT222Q8N1A0 295 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 AADATQ8N5Z0 425 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 NUDCD2Q8WVJ2 157 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 ADAMTS14Q8WXS8 1223 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 HVCN1Q96D96 273 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 CCDC51Q96ER9 411 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 ZC3HAV1LQ96H79 300 aaKnown RBP4.89□□□□□ -1.63
SSR3-209ENST00000498205 TCEANC2Q96MN5 208 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 ZNF830Q96NB3 372 aaPredicted RBP4.89□□□□□ -1.63
SSR3-209ENST00000498205 NEUROD6Q96NK8 337 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 CTAGE1Q96RT6 745 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 SEC62Q99442 399 aaKnown RBP4.89□□□□□ -1.63
SSR3-209ENST00000498205 KRTAP1-5Q9BYS1 174 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 NACAP1Q9BZK3 213 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 HSD3B7Q9H2F3 369 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 C6orf106Q9H6K1 298 aaPredicted RBP4.89□□□□□ -1.63
SSR3-209ENST00000498205 VEZTQ9HBM0 779 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 PRDM4Q9UKN5 801 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 KIAA1551Q9HCM1 1747 aa4.89□□□□□ -1.63
SSR3-209ENST00000498205 ITGB4P16144 1822 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 WNK3Q9BYP7 1800 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 TAF1P21675 1872 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 A0A0U1RQF3 1178 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 KLRF2D3W0D1 207 aa4.88□□□□□ -1.63
SSR3-209ENST00000498205 TAF4O00268 1085 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms