RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 ARHGAP9Q9BRR9 750 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 SPRY4Q9C004 299 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 SLC39A1Q9NY26 324 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 CTTNBP2NLQ9P2B4 639 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 AMACRQ9UHK6 382 aa18.36■□□□□ 0.53
PRKCB-209ENST00000498058 ANKRD66B4E2M5 251 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 KCNK1O00180 336 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 PYGLP06737 847 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 ACP5P13686 325 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 KDELR1P24390 212 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 CSTF2P33240 577 aaKnown RBP eCLIP18.35■□□□□ 0.53
PRKCB-209ENST00000498058 RPL26P61254 145 aaKnown RBP18.35■□□□□ 0.53
PRKCB-209ENST00000498058 GPLD1P80108 840 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 NFATC2Q13469 925 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 PEX6Q13608 980 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 LRP8Q14114 963 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 SNAP47Q5SQN1 464 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 IYDQ6PHW0 289 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 ARHGAP22Q7Z5H3 698 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 CCDC13Q8IYE1 715 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 PLD5Q8N7P1 536 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 SLC38A3Q99624 504 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 DDA1Q9BW61 102 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 CEP41Q9BYV8 373 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 FAM83DQ9H4H8 585 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 VPS18Q9P253 973 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 RPL26L1Q9UNX3 145 aaKnown RBP18.35■□□□□ 0.53
PRKCB-209ENST00000498058 ADGRG1Q9Y653 693 aa18.35■□□□□ 0.53
PRKCB-209ENST00000498058 B4E171 279 aa18.34■□□□□ 0.53
PRKCB-209ENST00000498058 ZW10O43264 779 aa18.34■□□□□ 0.53
PRKCB-209ENST00000498058 WISP1O95388 367 aa18.34■□□□□ 0.53
PRKCB-209ENST00000498058 LCA5LO95447 670 aa18.34■□□□□ 0.53
PRKCB-209ENST00000498058 TSPAN7P41732 249 aa18.34■□□□□ 0.53
PRKCB-209ENST00000498058 HHEXQ03014 270 aa18.34■□□□□ 0.53
PRKCB-209ENST00000498058 GALNT3Q14435 633 aa18.34■□□□□ 0.53
PRKCB-209ENST00000498058 XKR5Q6UX68 686 aa18.34■□□□□ 0.53
PRKCB-209ENST00000498058 LYSMD3Q7Z3D4 306 aa18.34■□□□□ 0.53
PRKCB-209ENST00000498058 FAM129CQ86XR2 697 aa18.34■□□□□ 0.53
PRKCB-209ENST00000498058 RAVER1Q8IY67 606 aaKnown RBP18.34■□□□□ 0.53
PRKCB-209ENST00000498058 CCNYQ8ND76 341 aa18.34■□□□□ 0.53
PRKCB-209ENST00000498058 RNF157Q96PX1 679 aa18.34■□□□□ 0.53
PRKCB-209ENST00000498058 TRIB3Q96RU7 358 aa18.34■□□□□ 0.53
PRKCB-209ENST00000498058 CTRCQ99895 268 aa18.34■□□□□ 0.53
PRKCB-209ENST00000498058 CLMPQ9H6B4 373 aa18.34■□□□□ 0.53
PRKCB-209ENST00000498058 APMAPQ9HDC9 416 aa18.34■□□□□ 0.53
PRKCB-209ENST00000498058 SARS2Q9NP81 518 aaKnown RBP18.34■□□□□ 0.53
PRKCB-209ENST00000498058 SPTLC3Q9NUV7 552 aa18.34■□□□□ 0.53
PRKCB-209ENST00000498058 ATXN10Q9UBB4 475 aa18.34■□□□□ 0.53
PRKCB-209ENST00000498058 C3orf70A6NLC5 250 aaPredicted RBP18.33■□□□□ 0.52
PRKCB-209ENST00000498058 TERTO14746 1132 aaKnown RBP18.33■□□□□ 0.52
PRKCB-209ENST00000498058 RAD1O60671 282 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 H2AFZP0C0S5 128 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 PIRTP0C851 137 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 ZNF8P17098 575 aaPredicted RBP18.33■□□□□ 0.52
PRKCB-209ENST00000498058 IFI35P80217 286 aaPredicted RBP18.33■□□□□ 0.52
PRKCB-209ENST00000498058 CCZ1BP86790 482 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 CCZ1P86791 482 aaPredicted RBP18.33■□□□□ 0.52
PRKCB-209ENST00000498058 PPIDQ08752 370 aaKnown RBP18.33■□□□□ 0.52
PRKCB-209ENST00000498058 NPNTQ6UXI9 565 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 H2AFVQ71UI9 128 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 B4GALNT4Q76KP1 1039 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 TIPARPQ7Z3E1 657 aaKnown RBP18.33■□□□□ 0.52
PRKCB-209ENST00000498058 ZSCAN1Q8NBB4 408 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 GPR26Q8NDV2 337 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 OR10G6Q8NH81 332 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 RTP4Q96DX8 246 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 AHCYL2Q96HN2 611 aaKnown RBP18.33■□□□□ 0.52
PRKCB-209ENST00000498058 DPYSL5Q9BPU6 564 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 MLPHQ9BV36 600 aaPredicted RBP18.33■□□□□ 0.52
PRKCB-209ENST00000498058 TBC1D10AQ9BXI6 508 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 FAM117AQ9C073 453 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 PRDM8Q9NQV8 689 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 SCHIP1Q9P0W5 487 aaPredicted RBP18.33■□□□□ 0.52
PRKCB-209ENST00000498058 UVRAGQ9P2Y5 699 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 PILRAQ9UKJ1 303 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 DNPEPQ9ULA0 475 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 INTUQ9ULD6 942 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 SPTA1P02549 2419 aa18.33■□□□□ 0.52
PRKCB-209ENST00000498058 SUV39H1O43463 412 aa18.32■□□□□ 0.52
PRKCB-209ENST00000498058 DUX1O43812 170 aa18.32■□□□□ 0.52
PRKCB-209ENST00000498058 NUAK1O60285 661 aa18.32■□□□□ 0.52
PRKCB-209ENST00000498058 SNX2O60749 519 aa18.32■□□□□ 0.52
PRKCB-209ENST00000498058 KRT7P08729 469 aa18.32■□□□□ 0.52
PRKCB-209ENST00000498058 MX2P20592 715 aa18.32■□□□□ 0.52
PRKCB-209ENST00000498058 MAGEA1P43355 309 aa18.32■□□□□ 0.52
PRKCB-209ENST00000498058 ATP1A2P50993 1020 aa18.32■□□□□ 0.52
PRKCB-209ENST00000498058 KCNC4Q03721 635 aa18.32■□□□□ 0.52
PRKCB-209ENST00000498058 WDR74Q6RFH5 385 aaPredicted RBP18.32■□□□□ 0.52
PRKCB-209ENST00000498058 RAD9BQ6WBX8 426 aa18.32■□□□□ 0.52
PRKCB-209ENST00000498058 KDELC2Q7Z4H8 507 aa18.32■□□□□ 0.52
PRKCB-209ENST00000498058 CACNA2D3Q8IZS8 1091 aa18.32■□□□□ 0.52
PRKCB-209ENST00000498058 IL22RA1Q8N6P7 574 aa18.32■□□□□ 0.52
PRKCB-209ENST00000498058 CTNNBL1Q8WYA6 563 aaPredicted RBP18.32■□□□□ 0.52
PRKCB-209ENST00000498058 NCSTNQ92542 709 aa18.32■□□□□ 0.52
PRKCB-209ENST00000498058 TRIM44Q96DX7 344 aaPredicted RBP18.32■□□□□ 0.52
PRKCB-209ENST00000498058 PKD2L2Q9NZM6 624 aa18.32■□□□□ 0.52
PRKCB-209ENST00000498058 SLC23A2Q9UGH3 650 aa18.32■□□□□ 0.52
PRKCB-209ENST00000498058 SHOC2Q9UQ13 582 aa18.32■□□□□ 0.52
PRKCB-209ENST00000498058 GRID2O43424 1007 aa18.31■□□□□ 0.52
PRKCB-209ENST00000498058 F3P13726 295 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms