RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 EPOP01588 193 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 FGF1P05230 155 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 RBL1P28749 1068 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 RBMS1P29558 406 aaKnown RBP15.2■□□□□ 0.02
NUP50-219ENST00000497960 DCDC1P59894 354 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 MPP3Q13368 585 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 C3orf38Q5JPI3 329 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 PAPD7Q5XG87 772 aaKnown RBP15.2■□□□□ 0.02
NUP50-219ENST00000497960 ITPRIPL1Q6GPH6 555 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 C19orf48Q6RUI8 117 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 KDELC1Q6UW63 502 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 SFTPA2Q8IWL1 248 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 SNIP1Q8TAD8 396 aaKnown RBP15.2■□□□□ 0.02
NUP50-219ENST00000497960 HNRNPLLQ8WVV9 542 aaKnown RBP15.2■□□□□ 0.02
NUP50-219ENST00000497960 C1orf54Q8WWF1 131 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 EID2BQ96D98 161 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 MS4A14Q96JA4 679 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 CAPZA3Q96KX2 299 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 ZNF578Q96N58 590 aaPredicted RBP15.2■□□□□ 0.02
NUP50-219ENST00000497960 ZSCAN5AQ9BUG6 496 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 FRMD8P1Q9BZ68 369 aaPredicted RBP15.2■□□□□ 0.02
NUP50-219ENST00000497960 RMI1Q9H9A7 625 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 SMARCAL1Q9NZC9 954 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 CNOT6Q9ULM6 557 aaKnown RBP15.2■□□□□ 0.02
NUP50-219ENST00000497960 LHX6Q9UPM6 363 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 SATB2Q9UPW6 733 aa15.2■□□□□ 0.02
NUP50-219ENST00000497960 GOLGA6L10A0A0M3HER8 536 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 LOC285095A0A1B0GVY8 99 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 A0A1W2PQM1 296 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 D6RAR5 112 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 F5H423 210 aaPredicted RBP15.19■□□□□ 0.02
NUP50-219ENST00000497960 KIF2AO00139 706 aaPredicted RBP15.19■□□□□ 0.02
NUP50-219ENST00000497960 FANCGO15287 622 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 KCNN4O15554 427 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 TLX3O43711 291 aaPredicted RBP15.19■□□□□ 0.02
NUP50-219ENST00000497960 LIASO43766 372 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 DXOO77932 396 aaKnown RBP15.19■□□□□ 0.02
NUP50-219ENST00000497960 ECEL1O95672 775 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 EIF2S3P41091 472 aaKnown RBP15.19■□□□□ 0.02
NUP50-219ENST00000497960 MAZP56270 477 aaKnown RBP15.19■□□□□ 0.02
NUP50-219ENST00000497960 PDPK2PQ6A1A2 396 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 SPRED1Q7Z699 444 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 C17orf82Q86X59 251 aaPredicted RBP15.19■□□□□ 0.02
NUP50-219ENST00000497960 ARL14Q8N4G2 192 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 SLC25A41Q8N5S1 370 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 TRAM1L1Q8N609 369 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 GPR26Q8NDV2 337 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 IPMKQ8NFU5 416 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 WDR36Q8NI36 951 aaKnown RBP15.19■□□□□ 0.02
NUP50-219ENST00000497960 TMEM74Q96NL1 305 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 FSD1LQ9BXM9 530 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 STRADBQ9C0K7 418 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 TRABDQ9H4I3 376 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 C10orf88Q9H8K7 445 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 THSD1Q9NS62 852 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 HACD3Q9P035 362 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 NFKBIL1Q9UBC1 381 aaPredicted RBP15.19■□□□□ 0.02
NUP50-219ENST00000497960 PLEKHM1Q9Y4G2 1056 aa15.19■□□□□ 0.02
NUP50-219ENST00000497960 OAS3Q9Y6K5 1087 aaKnown RBP15.19■□□□□ 0.02
NUP50-219ENST00000497960 CCDC187A0A096LP49 1063 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 CASC3O15234 703 aaKnown RBP15.18■□□□□ 0.02
NUP50-219ENST00000497960 DNAJC6O75061 913 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 ANXA9O76027 345 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 SLC25A14O95258 325 aaPredicted RBP15.18■□□□□ 0.02
NUP50-219ENST00000497960 HLA-DPA1P20036 260 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 DEKP35659 375 aaKnown RBP15.18■□□□□ 0.02
NUP50-219ENST00000497960 ABCG1P45844 678 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 GEMP55040 296 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 INHBCP55103 352 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 ERVPABLB-1P60509 514 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 SNX1Q13596 522 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 SIX1Q15475 284 aaPredicted RBP15.18■□□□□ 0.02
NUP50-219ENST00000497960 COL28A1Q2UY09 1125 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 SIRPB2Q5JXA9 342 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 ZDHHC20Q5W0Z9 365 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 FOXR1Q6PIV2 292 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 NAGSQ8N159 534 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 SLC35B2Q8TB61 432 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 ACTRT1Q8TDG2 376 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 ZNF592Q92610 1267 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 OXNAD1Q96HP4 312 aaPredicted RBP15.18■□□□□ 0.02
NUP50-219ENST00000497960 MRGPRX2Q96LB1 330 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 GBA3Q9H227 469 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 EPB41L5Q9HCM4 733 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 TRIM39Q9HCM9 518 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 TTC7AQ9ULT0 858 aaPredicted RBP15.18■□□□□ 0.02
NUP50-219ENST00000497960 PCDHGA8Q9Y5G5 932 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 SPO11Q9Y5K1 396 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 ST14Q9Y5Y6 855 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 ZFYVE26Q68DK2 2539 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 CHD6Q8TD26 2715 aa15.18■□□□□ 0.02
NUP50-219ENST00000497960 GPR89AB7ZAQ6 455 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 AURKAO14965 403 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 NUAK1O60285 661 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 GPR89BP0CG08 455 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 BPIP17213 487 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 ALDH4A1P30038 563 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 HMGCLP35914 325 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 CHRNA4P43681 627 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 PDX1P52945 283 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms