RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 NDUFS3O75489 264 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 CNTN5O94779 1100 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 NXPH3O95157 252 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 GGPS1O95749 300 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 ADAP00813 363 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 ERBB2P04626 1255 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 RETP07949 1114 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 ABCB1P08183 1280 aaPredicted RBP2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 SRPRAP08240 638 aaKnown RBP2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 HOXC6P09630 235 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 RFPL3SP0C7P2 107 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 THEGLP0DJG4 465 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 IRF1P10914 325 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 AGAP20933 346 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 TGM2P21980 687 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 CPT2P23786 658 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 TNFRSF8P28908 595 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 TLX1P31314 330 aaPredicted RBP2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 FMO4P31512 558 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 RYKP34925 604 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 DIO1P49895 249 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 JAK3P52333 1124 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 STAT2P52630 851 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 ACLYP53396 1101 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 NAGLUP54802 743 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 GP2P55259 537 aaKnown RBP2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 SLC37A1P57057 533 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 SUMO2P61956 95 aaKnown RBP2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 TXNL4AP83876 142 aaKnown RBP2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 TFAP4Q01664 338 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 RHAGQ02094 409 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 UBXN1Q04323 297 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 CCDC15Q0P6D6 951 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 PPP2R5CQ13362 524 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 ITGA7Q13683 1181 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 LY6DQ14210 128 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 ZNF273Q14593 569 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 IL13RA2Q14627 380 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 HIST2H2ACQ16777 129 aaPredicted RBP2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 TWISTNBQ3B726 338 aaPredicted RBP2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 GLE1Q53GS7 698 aaKnown RBP2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 KRBOX4Q5JUW0 171 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 GKAP1Q5VSY0 366 aaPredicted RBP2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 KIAA0930Q6ICG6 404 aaPredicted RBP2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 FOXR2Q6PJQ5 311 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 ZNF474Q6S9Z5 364 aaPredicted RBP2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 PCSK4Q6UW60 755 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 PET117Q6UWS5 81 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 C15orf39Q6ZRI6 1047 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 Q6ZSN1 163 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 SEPT14Q6ZU15 432 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 CATSPER4Q7RTX7 472 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 NUP54Q7Z3B4 507 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 GDF7Q7Z4P5 450 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 GPR142Q7Z601 462 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 FAM124AQ86V42 546 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 ELOA2Q8IYF1 753 aaPredicted RBP2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 LGI4Q8N135 537 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 D2HGDHQ8N465 521 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 PI4KAP1Q8N8J0 262 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 KIF18AQ8NI77 898 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 ADAMTS14Q8WXS8 1223 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 SUSD6Q92537 303 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 SMARCE1Q969G3 411 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 RFKQ969G6 155 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 LENG9Q96B70 501 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 PGBD1Q96JS3 809 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 TEFMQ96QE5 360 aaKnown RBP2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 FNBP1Q96RU3 617 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 LMF1Q96S06 567 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 TSPAN18Q96SJ8 248 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 EGFL8Q99944 293 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 NAA11Q9BSU3 229 aaPredicted RBP2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 UTP14AQ9BVJ6 771 aaKnown RBP2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 FSD1LQ9BXM9 530 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 ACTRT3Q9BYD9 372 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 HIPK3Q9H422 1215 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 SLC32A1Q9H598 525 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 OPA3Q9H6K4 179 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 WDR26Q9H7D7 661 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 Q9N2J8 555 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 IL1RAPL2Q9NP60 686 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 MID1IP1Q9NPA3 183 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 NRIP3Q9NQ35 241 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 KLC4Q9NSK0 619 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 SH3BP4Q9P0V3 963 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 CPSF2Q9P2I0 782 aaKnown RBP2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 UPB1Q9UBR1 384 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 DNAJB9Q9UBS3 223 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 AMACRQ9UHK6 382 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 KLK13Q9UKR3 277 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 CDH7Q9ULB5 785 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 B3GNT3Q9Y2A9 372 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 LIPGQ9Y5X9 500 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 SIRT4Q9Y6E7 314 aaPredicted RBP2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 ECM29Q5VYK3 1845 aa2.51□□□□□ -2.01
CKS1BP2-201ENST00000497342 SDK1Q7Z5N4 2213 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 ELP1O95163 1332 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 MAP3K15Q6ZN16 1313 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 ARHGAP10A1A4S6 786 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms