RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 MATR3P43243 847 aaKnown RBP eCLIP3.29□□□□□ -1.886e-7■□□□□ 8.4
PHC3-216ENST00000497171 LMAN1P49257 510 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 MXI1P50539 228 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 DLX5P56178 289 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 SEC61A1P61619 476 aaKnown RBP3.29□□□□□ -1.88
PHC3-216ENST00000497171 IFI35P80217 286 aaPredicted RBP3.29□□□□□ -1.88
PHC3-216ENST00000497171 ZBED6P86452 979 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 TROAPQ12815 778 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 GRSF1Q12849 480 aaKnown RBP eCLIP3.29□□□□□ -1.88
PHC3-216ENST00000497171 PRPF4BQ13523 1007 aaKnown RBP3.29□□□□□ -1.88
PHC3-216ENST00000497171 PNLIPRP3Q17RR3 467 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 TMEM198Q66K66 360 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 GPR139Q6DWJ6 353 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 JADE1Q6IE81 842 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 DUS1LQ6P1R4 473 aaKnown RBP3.29□□□□□ -1.88
PHC3-216ENST00000497171 GALNT5Q7Z7M9 940 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 RND1Q92730 232 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 OR2A14Q96R47 310 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 EPYCQ99645 322 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 SEPT5Q99719 369 aaPredicted RBP3.29□□□□□ -1.88
PHC3-216ENST00000497171 SLF1Q9BQI6 1058 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 C1QTNF4Q9BXJ3 329 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 HRH4Q9H3N8 390 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 PIGMQ9H3S5 423 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 ACSS1Q9NUB1 689 aaPredicted RBP3.29□□□□□ -1.88
PHC3-216ENST00000497171 ARHGEF38Q9NXL2 777 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 COPG2Q9UBF2 871 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 NRBP1Q9UHY1 535 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 SNX9Q9Y5X1 595 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 CLIC4Q9Y696 253 aa3.29□□□□□ -1.88
PHC3-216ENST00000497171 DOCK7Q96N67 2140 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 IGHV4-28A0A0C4DH34 117 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 LINC01553A4QN01 128 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 LRRC72A6NJI9 287 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 OGG1O15527 345 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 BUB3O43684 328 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 KCNK5O95279 499 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 FTCDO95954 541 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 GLUD1P00367 558 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 HIST1H2ABP04908 130 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 TUBBP07437 444 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 ACTN1P12814 892 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 HIST1H2ADP20671 130 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 AMTP48728 403 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 GLUD2P49448 558 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 TAS2R40P59535 323 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 EEF1A2Q05639 463 aaKnown RBP3.28□□□□□ -1.88
PHC3-216ENST00000497171 FOXM1Q08050 763 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 BECN1Q14457 450 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 CCDC6Q16204 474 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 CTF1Q16619 201 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 IGSF11Q5DX21 431 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 HIST3H2AQ7L7L0 130 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 CACNA2D4Q7Z3S7 1137 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 CCDC190Q86UF4 302 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 LINC00346Q8IVM7 164 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 RNF168Q8IYW5 571 aaPredicted RBP3.28□□□□□ -1.88
PHC3-216ENST00000497171 SCYL3Q8IZE3 742 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 HMGCLL1Q8TB92 370 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 ORAI1Q96D31 301 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 MTBPQ96DY7 904 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 NODALQ96S42 347 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 SMC6Q96SB8 1091 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 PAFAH2Q99487 392 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 HAUS8Q9BT25 410 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 MMTAG2Q9BU76 263 aaKnown RBP3.28□□□□□ -1.88
PHC3-216ENST00000497171 TEX12Q9BXU0 123 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 NKIRAS2Q9NYR9 191 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 CPSF2Q9P2I0 782 aaKnown RBP3.28□□□□□ -1.88
PHC3-216ENST00000497171 CMAHPQ9Y471 501 aa3.28□□□□□ -1.88
PHC3-216ENST00000497171 MAGED1Q9Y5V3 778 aaPredicted RBP3.28□□□□□ -1.88
PHC3-216ENST00000497171 ATXN2Q99700 1313 aaKnown RBP3.27□□□□□ -1.89
PHC3-216ENST00000497171 M0QZ24 198 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 SOCS6O14544 535 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 NDUFS7O75251 213 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 ENTPD3O75355 529 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 ERAL1O75616 437 aaKnown RBP3.27□□□□□ -1.89
PHC3-216ENST00000497171 IGLV2-11P01706 119 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 SELLP14151 372 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 DDX5P17844 614 aaKnown RBP3.27□□□□□ -1.89
PHC3-216ENST00000497171 MAOAP21397 527 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 UBA1P22314 1058 aaKnown RBP3.27□□□□□ -1.89
PHC3-216ENST00000497171 BDKRB2P30411 391 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 HOXC9P31274 260 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 MSH2P43246 934 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 STAT2P52630 851 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 KRTAP10-3P60369 221 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 CSNK2A1P68400 391 aaPredicted RBP3.27□□□□□ -1.89
PHC3-216ENST00000497171 ABATP80404 500 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 TMF1P82094 1093 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 MRPS34P82930 218 aaKnown RBP3.27□□□□□ -1.89
PHC3-216ENST00000497171 PPP2R2BQ00005 443 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 Q0VFX4 171 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 KIF5AQ12840 1032 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 GRIK2Q13002 908 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 KCNC3Q14003 757 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 RBM39Q14498 530 aaKnown RBP3.27□□□□□ -1.89
PHC3-216ENST00000497171 KRT33BQ14525 404 aa3.27□□□□□ -1.89
PHC3-216ENST00000497171 SLC39A14Q15043 492 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms