RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 STARD3NLO95772 234 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 EIF2DP41214 584 aaKnown RBP4.73□□□□□ -1.65
VPS36-206ENST00000497149 RAD52P43351 418 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 MMP14P50281 582 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 TAS2R38P59533 333 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 PDE1BQ01064 536 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 KIF5AQ12840 1032 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 DLG1Q12959 904 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 FHL1Q13642 323 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 CCNI2Q6ZMN8 369 aaPredicted RBP4.73□□□□□ -1.65
VPS36-206ENST00000497149 EPHX4Q8IUS5 362 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 ARID3BQ8IVW6 561 aaPredicted RBP4.73□□□□□ -1.65
VPS36-206ENST00000497149 ADHFE1Q8IWW8 467 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 SCYL3Q8IZE3 742 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 SMRP1Q8NCR6 262 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 SPATA22Q8NHS9 363 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 TEX12Q9BXU0 123 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 HIPK2Q9H2X6 1198 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 GAREM1Q9H706 876 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 PDE7BQ9NP56 450 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 PLSCR4Q9NRQ2 329 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 FBXL2Q9UKC9 423 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 PADI3Q9ULW8 664 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 TAF1P21675 1872 aa4.73□□□□□ -1.65
VPS36-206ENST00000497149 PASKQ96RG2 1323 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 LRRC72A6NJI9 287 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 LACTBL1A8MY62 500 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 PROB1E7EW31 1015 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 ANKRD28O15084 1053 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 PAPSS1O43252 624 aaPredicted RBP4.72□□□□□ -1.65
VPS36-206ENST00000497149 PMS2P2O95744 297 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 LINC00271P0C7V0 271 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 S1PR1P21453 382 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 SAT1P21673 171 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 TNFRSF8P28908 595 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 NRIP1P48552 1158 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 SUOXP51687 545 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 SPOCK1Q08629 439 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 KCNC3Q14003 757 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 PCLAFQ15004 111 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 SF3B4Q15427 424 aaKnown RBP eCLIP4.72□□□□□ -1.65
VPS36-206ENST00000497149 MYLK3Q32MK0 819 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 PAPD4Q6PIY7 484 aaKnown RBP4.72□□□□□ -1.65
VPS36-206ENST00000497149 CREB3L2Q70SY1 520 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 CCDC190Q86UF4 302 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 MCEMP1Q8IX19 187 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 RASGEF1CQ8N431 466 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 IL17RCQ8NAC3 791 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 ACVR1CQ8NER5 493 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 OR5R1Q8NH85 324 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 DUSP19Q8WTR2 217 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 SLC22A18Q96BI1 424 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 MED30Q96HR3 178 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 MARK4Q96L34 752 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 PCYT2Q99447 389 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 TM6SF1Q9BZW5 370 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 GIMAP4Q9NUV9 329 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 ARHGEF38Q9NXL2 777 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 WSB2Q9NYS7 404 aaPredicted RBP4.72□□□□□ -1.65
VPS36-206ENST00000497149 ZNF224Q9NZL3 707 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 SIX4Q9UIU6 781 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 DBNLQ9UJU6 430 aaKnown RBP4.72□□□□□ -1.65
VPS36-206ENST00000497149 KLHL20Q9Y2M5 609 aa4.72□□□□□ -1.65
VPS36-206ENST00000497149 PDS5AQ29RF7 1337 aaKnown RBP4.72□□□□□ -1.65
VPS36-206ENST00000497149 ZNF644Q9H582 1327 aaPredicted RBP4.72□□□□□ -1.65
VPS36-206ENST00000497149 FIBPO43427 364 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 PLPP2O43688 288 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 TMCC2O75069 709 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 ERAL1O75616 437 aaKnown RBP4.71□□□□□ -1.66
VPS36-206ENST00000497149 T-ENOLP0DO92 83 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 MMP9P14780 707 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 AKR1B1P15121 316 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 CORO1AP31146 461 aaKnown RBP4.71□□□□□ -1.66
VPS36-206ENST00000497149 PNLIPRP2P54317 469 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 RRP1P56182 461 aaKnown RBP4.71□□□□□ -1.66
VPS36-206ENST00000497149 CLDN20P56880 219 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 IFI35P80217 286 aaPredicted RBP4.71□□□□□ -1.66
VPS36-206ENST00000497149 ZXDBP98169 803 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 TNFAIP1Q13829 316 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 KCTD2Q14681 263 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 DLG2Q15700 870 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 NTRK2Q16620 822 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 GALNT5Q7Z7M9 940 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 GPR180Q86V85 440 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 KBTBD6Q86V97 674 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 SCML4Q8N228 414 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 EMC1Q8N766 993 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 SLC38A9Q8NBW4 561 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 NUDCD2Q8WVJ2 157 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 DNAAF4Q8WXU2 420 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 ABTB1Q969K4 478 aaPredicted RBP4.71□□□□□ -1.66
VPS36-206ENST00000497149 RTP4Q96DX8 246 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 THOC3Q96J01 351 aaKnown RBP4.71□□□□□ -1.66
VPS36-206ENST00000497149 QRFPRQ96P65 431 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 ZNF385AQ96PM9 386 aaKnown RBP4.71□□□□□ -1.66
VPS36-206ENST00000497149 SEMA3CQ99985 751 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 OSGEPL1Q9H4B0 414 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 ANKEF1Q9NU02 776 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 TMEM30AQ9NV96 361 aa4.71□□□□□ -1.66
VPS36-206ENST00000497149 TRMT1Q9NXH9 659 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms