RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 ZIM3Q96PE6 472 aa18.12■□□□□ 0.49
RGP1-202ENST00000496906 TCF12Q99081 682 aa18.12■□□□□ 0.49
RGP1-202ENST00000496906 CPNE1Q99829 537 aa18.12■□□□□ 0.49
RGP1-202ENST00000496906 MCMBPQ9BTE3 642 aa18.12■□□□□ 0.49
RGP1-202ENST00000496906 DHRS4Q9BTZ2 278 aa18.12■□□□□ 0.49
RGP1-202ENST00000496906 DUSP15Q9H1R2 295 aaPredicted RBP18.12■□□□□ 0.49
RGP1-202ENST00000496906 FBXO6Q9NRD1 293 aaPredicted RBP18.12■□□□□ 0.49
RGP1-202ENST00000496906 POC1B-GALNT4F8VUJ3 575 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 PRAMEF26H0Y7S4 382 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 INPP4BO15327 924 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 TCEA3O75764 348 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 AHSGP02765 367 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 SP9P0CG40 484 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 GP5P40197 560 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 EIF3BP55884 814 aaKnown RBP18.11■□□□□ 0.49
RGP1-202ENST00000496906 IFFO1Q0D2I5 559 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 SRSF5Q13243 272 aaKnown RBP18.11■□□□□ 0.49
RGP1-202ENST00000496906 INPP5AQ14642 412 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 ZNF789Q5FWF6 425 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 RNF187Q5TA31 235 aaPredicted RBP18.11■□□□□ 0.49
RGP1-202ENST00000496906 LYPLAL1Q5VWZ2 237 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 PACS1Q6VY07 963 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 STRA8Q7Z7C7 330 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 C11orf74Q86VG3 221 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 HEATR4Q86WZ0 1026 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 PHYKPLQ8IUZ5 450 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 SNX19Q92543 992 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 FOXJ1Q92949 421 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 MRRFQ96E11 262 aaKnown RBP18.11■□□□□ 0.49
RGP1-202ENST00000496906 CCDC97Q96F63 343 aaPredicted RBP18.11■□□□□ 0.49
RGP1-202ENST00000496906 HSPA12BQ96MM6 686 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 TTC1Q99614 292 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 TEX101Q9BY14 249 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 WDR26Q9H7D7 661 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 INTS10Q9NVR2 710 aaKnown RBP18.11■□□□□ 0.49
RGP1-202ENST00000496906 ZDHHC3Q9NYG2 299 aa18.11■□□□□ 0.49
RGP1-202ENST00000496906 PLXNB3Q9ULL4 1909 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 IGLV3-16A0A075B6K0 115 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 FPGTO14772 594 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 NDUFS3O75489 264 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 FAM155BO75949 473 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 IVLP07476 585 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 INHBAP08476 426 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 PPARGP37231 505 aaPredicted RBP18.1■□□□□ 0.49
RGP1-202ENST00000496906 MSH2P43246 934 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 NUBP1P53384 320 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 CSE1LP55060 971 aaKnown RBP18.1■□□□□ 0.49
RGP1-202ENST00000496906 CLDN2P57739 230 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 CDK3Q00526 305 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 ITIH4Q14624 930 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 LDLRAP1Q5SW96 308 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 LRIG3Q6UXM1 1119 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 GCNT7Q6ZNI0 430 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 TMEFF1Q8IYR6 380 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 EPS8L3Q8TE67 593 aaKnown RBP18.1■□□□□ 0.49
RGP1-202ENST00000496906 LPGAT1Q92604 370 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 COX14Q96I36 57 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 COPS8Q99627 209 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 LRFN3Q9BTN0 628 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 BOCQ9BWV1 1114 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 PPCSQ9HAB8 311 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 ZNF446Q9NWS9 450 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 ZSCAN32Q9NX65 697 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 TXNDC16Q9P2K2 825 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 SLC24A2Q9UI40 661 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 CA5BQ9Y2D0 317 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 HS3ST3A1Q9Y663 406 aa18.1■□□□□ 0.49
RGP1-202ENST00000496906 POM121BA6NF01 834 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 MEI4A8MW99 385 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 PFDN6O15212 129 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 GALR2O43603 387 aaPredicted RBP18.09■□□□□ 0.49
RGP1-202ENST00000496906 OR1I1O60431 355 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 MTX2O75431 263 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 HAUS5O94927 633 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 SLC25A14O95258 325 aaPredicted RBP18.09■□□□□ 0.49
RGP1-202ENST00000496906 CD27P26842 260 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 CD151P48509 253 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 B4GALNT1Q00973 533 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 ZNF844Q08AG5 666 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 KHDC1Q4VXA5 237 aaKnown RBP18.09■□□□□ 0.49
RGP1-202ENST00000496906 CNSTQ6PJW8 725 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 ZC3HC1Q86WB0 502 aaKnown RBP18.09■□□□□ 0.49
RGP1-202ENST00000496906 TDRPQ86YL5 185 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 RBFAQ8N0V3 343 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 ZBTB44Q8NCP5 570 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 GDAP1Q8TB36 358 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 DCAKDQ8WVC6 231 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 HIC2Q96JB3 615 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 SERAC1Q96JX3 654 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 BMFQ96LC9 184 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 RBBP8Q99708 897 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 TMEM109Q9BVC6 243 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 ROPN1BQ9BZX4 212 aaPredicted RBP18.09■□□□□ 0.49
RGP1-202ENST00000496906 VIPAS39Q9H9C1 493 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 ROPN1Q9HAT0 212 aaPredicted RBP18.09■□□□□ 0.49
RGP1-202ENST00000496906 ZNF180Q9UJW8 692 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 VPS9D1Q9Y2B5 631 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 OR1A2Q9Y585 309 aa18.09■□□□□ 0.49
RGP1-202ENST00000496906 SLCO1B1Q9Y6L6 691 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms