RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 RANBP17Q9H2T7 1088 aaKnown RBP4.1□□□□□ -1.75
TRIM4-205ENST00000496896 ZNF334Q9HCZ1 680 aaPredicted RBP4.1□□□□□ -1.75
TRIM4-205ENST00000496896 LTB4R2Q9NPC1 389 aa4.1□□□□□ -1.75
TRIM4-205ENST00000496896 AAR2Q9Y312 384 aaKnown RBP4.1□□□□□ -1.75
TRIM4-205ENST00000496896 LOXL2Q9Y4K0 774 aa4.1□□□□□ -1.75
TRIM4-205ENST00000496896 CEPT1Q9Y6K0 416 aa4.1□□□□□ -1.75
TRIM4-205ENST00000496896 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
TRIM4-205ENST00000496896 NKTRP30414 1462 aaKnown RBP4.1□□□□□ -1.75
TRIM4-205ENST00000496896 PLA2R1Q13018 1463 aa4.1□□□□□ -1.75
TRIM4-205ENST00000496896 SYCP2Q9BX26 1530 aa4.1□□□□□ -1.75
TRIM4-205ENST00000496896 USP32Q8NFA0 1604 aa4.1□□□□□ -1.75
TRIM4-205ENST00000496896 TAF1P21675 1872 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 EIF5BO60841 1220 aaKnown RBP4.09□□□□□ -1.75
TRIM4-205ENST00000496896 XBP1P17861 261 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 GNL1P36915 607 aaPredicted RBP4.09□□□□□ -1.75
TRIM4-205ENST00000496896 CDKN1AP38936 164 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 PDE1BQ01064 536 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 GAGE5Q13069 117 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 GAGE6Q13070 117 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 FGFBP1Q14512 234 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 WDR43Q15061 677 aaKnown RBP eCLIP4.09□□□□□ -1.75
TRIM4-205ENST00000496896 CCNYL2Q5T2Q4 361 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 ADAM5Q6NVV9 412 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 ZNF449Q6P9G9 518 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 BRAT1Q6PJG6 821 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 ZNF34Q8IZ26 560 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 IL17RCQ8NAC3 791 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 CADM4Q8NFZ8 388 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 OR13A1Q8NGR1 328 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 THAP6Q8TBB0 222 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 ST8SIA4Q92187 359 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 KIF1BPQ96EK5 621 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 CSTL1Q9H114 145 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 LRRC4Q9HBW1 653 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 SAGE1Q9NXZ1 904 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 DLGAP4Q9Y2H0 992 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 KNSTRNQ9Y448 316 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 KDM3AQ9Y4C1 1321 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 PLCH2O75038 1416 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 ADGRL1O94910 1474 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 ABCC1P33527 1531 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.09□□□□□ -1.75
TRIM4-205ENST00000496896 VWDEQ8N2E2 1590 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 SETBP1Q9Y6X0 1596 aa4.09□□□□□ -1.75
TRIM4-205ENST00000496896 WDR81Q562E7 1941 aa4.09□□□□□ -1.76
TRIM4-205ENST00000496896 NTN3O00634 580 aaPredicted RBP4.08□□□□□ -1.76
TRIM4-205ENST00000496896 ITGA2P17301 1181 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 CORO1AP31146 461 aaKnown RBP4.08□□□□□ -1.76
TRIM4-205ENST00000496896 HOXC9P31274 260 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 TIMP3P35625 211 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 MAPK9P45984 424 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 HOXA1P49639 335 aaPredicted RBP4.08□□□□□ -1.76
TRIM4-205ENST00000496896 MMP14P50281 582 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 MYOM1P52179 1685 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 TERF1P54274 439 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 FOXM1Q08050 763 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 OLIG2Q13516 323 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 BECN1Q14457 450 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 ZNF234Q14588 700 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 KANK1Q14678 1352 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 DRAP1Q14919 205 aaPredicted RBP4.08□□□□□ -1.76
TRIM4-205ENST00000496896 SIGIRRQ6IA17 410 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 ASB18Q6ZVZ8 466 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 SLC9B2Q86UD5 537 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 ARMC8Q8IUR7 673 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 SMAP1Q8IYB5 467 aaPredicted RBP4.08□□□□□ -1.76
TRIM4-205ENST00000496896 PCDH20Q8N6Y1 951 aaKnown RBP4.08□□□□□ -1.76
TRIM4-205ENST00000496896 TSPYL6Q8N831 410 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 DMBX1Q8NFW5 382 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 BBS10Q8TAM1 723 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 DUSP19Q8WTR2 217 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 QRFPRQ96P65 431 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 TMEM47Q9BQJ4 181 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 SYT17Q9BSW7 474 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 POLR3GLQ9BT43 218 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 DISP3Q9P2K9 1392 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 PGAP2Q9UHJ9 254 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 HAO1Q9UJM8 370 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 RALYQ9UKM9 306 aaKnown RBP4.08□□□□□ -1.76
TRIM4-205ENST00000496896 ACSL5Q9ULC5 683 aa4.08□□□□□ -1.76
TRIM4-205ENST00000496896 ISY1Q9ULR0 285 aaKnown RBP4.08□□□□□ -1.76
TRIM4-205ENST00000496896 KIF26BQ2KJY2 2108 aa4.07□□□□□ -1.76
TRIM4-205ENST00000496896 MAP3K4Q9Y6R4 1608 aa4.07□□□□□ -1.76
TRIM4-205ENST00000496896 LMTK2Q8IWU2 1503 aa4.07□□□□□ -1.76
TRIM4-205ENST00000496896 FANCAO15360 1455 aa4.07□□□□□ -1.76
TRIM4-205ENST00000496896 POLR3AO14802 1390 aaPredicted RBP4.07□□□□□ -1.76
TRIM4-205ENST00000496896 NSD2O96028 1365 aa4.07□□□□□ -1.76
TRIM4-205ENST00000496896 CAPN9O14815 690 aa4.07□□□□□ -1.76
TRIM4-205ENST00000496896 SPINT2O43291 252 aa4.07□□□□□ -1.76
TRIM4-205ENST00000496896 WDR1O75083 606 aa4.07□□□□□ -1.76
TRIM4-205ENST00000496896 SLC22A3O75751 556 aa4.07□□□□□ -1.76
TRIM4-205ENST00000496896 MYOD1P15172 320 aa4.07□□□□□ -1.76
TRIM4-205ENST00000496896 ABCD3P28288 659 aa4.07□□□□□ -1.76
TRIM4-205ENST00000496896 FMO5P49326 533 aa4.07□□□□□ -1.76
TRIM4-205ENST00000496896 NEXNQ0ZGT2 675 aa4.07□□□□□ -1.76
TRIM4-205ENST00000496896 GRIK2Q13002 908 aa4.07□□□□□ -1.76
TRIM4-205ENST00000496896 DECR1Q16698 335 aa4.07□□□□□ -1.76
TRIM4-205ENST00000496896 ALG11Q2TAA5 492 aa4.07□□□□□ -1.76
TRIM4-205ENST00000496896 FAM69AQ5T7M9 428 aa4.07□□□□□ -1.76
TRIM4-205ENST00000496896 SLC9C2Q5TAH2 1124 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms