RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 KCNMB4Q86W47 210 aa18.19■□□□□ 0.5
TSSC4-210ENST00000496468 PALM2Q8IXS6 379 aa18.19■□□□□ 0.5
TSSC4-210ENST00000496468 NXPE1Q8N323 547 aa18.19■□□□□ 0.5
TSSC4-210ENST00000496468 DDHD1Q8NEL9 900 aa18.19■□□□□ 0.5
TSSC4-210ENST00000496468 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.19■□□□□ 0.5
TSSC4-210ENST00000496468 CERS2Q96G23 380 aa18.19■□□□□ 0.5
TSSC4-210ENST00000496468 SGSM3Q96HU1 749 aa18.19■□□□□ 0.5
TSSC4-210ENST00000496468 COX14Q96I36 57 aa18.19■□□□□ 0.5
TSSC4-210ENST00000496468 FAM167BQ9BTA0 163 aa18.19■□□□□ 0.5
TSSC4-210ENST00000496468 ZCCHC2Q9C0B9 1178 aaKnown RBP18.19■□□□□ 0.5
TSSC4-210ENST00000496468 FAM96AQ9H5X1 160 aa18.19■□□□□ 0.5
TSSC4-210ENST00000496468 UGT1A7Q9HAW7 530 aa18.19■□□□□ 0.5
TSSC4-210ENST00000496468 UGT1A10Q9HAW8 530 aa18.19■□□□□ 0.5
TSSC4-210ENST00000496468 UGT1A8Q9HAW9 530 aa18.19■□□□□ 0.5
TSSC4-210ENST00000496468 PLAC1Q9HBJ0 212 aa18.19■□□□□ 0.5
TSSC4-210ENST00000496468 DMDP11532 3685 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 TRBV5-4A0A0C4DH59 114 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 A0A1B0GVT2 93 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 GOLGA8KD6RF30 607 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 GOLGA8TH3BQL2 631 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 TLR4O00206 839 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 PRSS56P0CW18 603 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 ACRV1P26436 265 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 NXPH1P58417 271 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 TRIM61Q5EBN2 209 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 GPRC6AQ5T6X5 926 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 ZNF470Q6ECI4 717 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 MRNIPQ6NTE8 343 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 PARGQ86W56 976 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 DCP2Q8IU60 420 aaKnown RBP18.18■□□□□ 0.5
TSSC4-210ENST00000496468 RELL1Q8IUW5 271 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 GABPB2Q8TAK5 448 aaPredicted RBP18.18■□□□□ 0.5
TSSC4-210ENST00000496468 WDR92Q96MX6 357 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 TTC25Q96NG3 672 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 LGR4Q9BXB1 951 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 CDC42EP4Q9H3Q1 356 aaKnown RBP18.18■□□□□ 0.5
TSSC4-210ENST00000496468 ARFGAP3Q9NP61 516 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 PPANQ9NQ55 473 aaKnown RBP18.18■□□□□ 0.5
TSSC4-210ENST00000496468 MARCH4Q9P2E8 410 aaPredicted RBP18.18■□□□□ 0.5
TSSC4-210ENST00000496468 NCDNQ9UBB6 729 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 TMPRSS11EQ9UL52 423 aa18.18■□□□□ 0.5
TSSC4-210ENST00000496468 CNOT6Q9ULM6 557 aaKnown RBP18.18■□□□□ 0.5
TSSC4-210ENST00000496468 OAS3Q9Y6K5 1087 aaKnown RBP18.18■□□□□ 0.5
TSSC4-210ENST00000496468 AGAP14A8MT82 685 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 CD3EAPO15446 510 aaKnown RBP18.17■□□□□ 0.5
TSSC4-210ENST00000496468 MTX2O75431 263 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 SPAG6O75602 509 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 GSTA2P09210 222 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 CA5AP35218 305 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 CDKN1CP49918 316 aaPredicted RBP18.17■□□□□ 0.5
TSSC4-210ENST00000496468 FRG1Q14331 258 aaKnown RBP18.17■□□□□ 0.5
TSSC4-210ENST00000496468 CCDC6Q16204 474 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 DBN1Q16643 649 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 TPRG1LQ5T0D9 272 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 LYPLAL1Q5VWZ2 237 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 NEPROQ6NW34 567 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 SERPINA9Q86WD7 417 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 PIANPQ8IYJ0 282 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 CALML6Q8TD86 181 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 TTC1Q99614 292 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 COPS8Q99627 209 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 VPS37BQ9H9H4 285 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 NINJ2Q9NZG7 142 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 VPS18Q9P253 973 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 KLQ9UEF7 1012 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 ANKRD6Q9Y2G4 727 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 LRP4O75096 1905 aa18.17■□□□□ 0.5
TSSC4-210ENST00000496468 SPTY2D1-AS1A0A0U1RR47 76 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 PATE3B3GLJ2 98 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 CFAP99D6REC4 459 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 ASMTLO95671 621 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 TUBBP07437 444 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 FAM153BP0C7A2 387 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 ERVK-10P10266 1014 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 RALBP11234 206 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 MSH3P20585 1137 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 OGNP20774 298 aaKnown RBP18.16■□□□□ 0.5
TSSC4-210ENST00000496468 PMLP29590 882 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 SSTR1P30872 391 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 STX2P32856 288 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 PPARGP37231 505 aaPredicted RBP18.16■□□□□ 0.5
TSSC4-210ENST00000496468 TTPAP49638 278 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 GRIK2Q13002 908 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 GTF2H3Q13889 308 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 SEMA3AQ14563 771 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 FAM153CQ494X1 144 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 RNF187Q5TA31 235 aaPredicted RBP18.16■□□□□ 0.5
TSSC4-210ENST00000496468 TRMT10BQ6PF06 316 aaKnown RBP18.16■□□□□ 0.5
TSSC4-210ENST00000496468 SLC23A3Q6PIS1 610 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 ENPP7Q6UWV6 458 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 CERS6Q6ZMG9 384 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 CCNI2Q6ZMN8 369 aaPredicted RBP18.16■□□□□ 0.5
TSSC4-210ENST00000496468 LMNTD2Q8IXW0 634 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 UNC5BQ8IZJ1 945 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 OR56A4Q8NGH8 313 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 PDXPQ96GD0 296 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 DCUN1D1Q96GG9 259 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 NUSAP1Q9BXS6 441 aaKnown RBP18.16■□□□□ 0.5
TSSC4-210ENST00000496468 PARD6BQ9BYG5 372 aa18.16■□□□□ 0.5
TSSC4-210ENST00000496468 CAPN10Q9HC96 672 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms