RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 VAT1Q99536 393 aa12.62□□□□□ -0.39
PTPRF-214ENST00000496043 NUDT22Q9BRQ3 303 aa12.62□□□□□ -0.39
PTPRF-214ENST00000496043 ZSCAN5AQ9BUG6 496 aa12.62□□□□□ -0.39
PTPRF-214ENST00000496043 B3GNT4Q9C0J1 378 aa12.62□□□□□ -0.39
PTPRF-214ENST00000496043 UBP1Q9NZI7 540 aa12.62□□□□□ -0.39
PTPRF-214ENST00000496043 FAM153AQ9UHL3 310 aa12.62□□□□□ -0.39
PTPRF-214ENST00000496043 ZNF711Q9Y462 761 aa12.62□□□□□ -0.39
PTPRF-214ENST00000496043 ARHGEF17Q96PE2 2063 aaPredicted RBP12.61□□□□□ -0.39
PTPRF-214ENST00000496043 PTPRQQ9UMZ3 2332 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 ITPR1Q14643 2758 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 KIF26BQ2KJY2 2108 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 OR5K4A6NMS3 321 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 SNX2O60749 519 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 EPOP01588 193 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 ACP5P13686 325 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 ZNF8P17098 575 aaPredicted RBP12.61□□□□□ -0.39
PTPRF-214ENST00000496043 ETV5P41161 510 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 FASLGP48023 281 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 PPM1FP49593 454 aaPredicted RBP12.61□□□□□ -0.39
PTPRF-214ENST00000496043 CLCNKAP51800 687 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 DCDC1P59894 354 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 WASHC5Q12768 1159 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 C16orf72Q14CZ0 275 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 ZNF569Q5MCW4 686 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 ALS2CLQ60I27 953 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 TMEM71Q6P5X7 295 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 SLC9B2Q86UD5 537 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 ZC3H18Q86VM9 953 aaKnown RBP12.61□□□□□ -0.39
PTPRF-214ENST00000496043 CCDC50Q8IVM0 306 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 OR10G6Q8NH81 332 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 SLC37A2Q8TED4 501 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 CALR3Q96L12 384 aaKnown RBP12.61□□□□□ -0.39
PTPRF-214ENST00000496043 PANX2Q96RD6 677 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 OR2AG1Q9H205 316 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 STN1Q9H668 368 aaKnown RBP12.61□□□□□ -0.39
PTPRF-214ENST00000496043 ATXN10Q9UBB4 475 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 TBC1D29Q9UFV1 150 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 KCNK6Q9Y257 313 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 PCDHB11Q9Y5F2 797 aa12.61□□□□□ -0.39
PTPRF-214ENST00000496043 PCYT1BQ9Y5K3 369 aaPredicted RBP12.61□□□□□ -0.39
PTPRF-214ENST00000496043 EPN1Q9Y6I3 576 aaPredicted RBP12.61□□□□□ -0.39
PTPRF-214ENST00000496043 ATRXP46100 2492 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 hCG_1818297A0A087WSY0 165 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 KIR2DS5A0A0G2JLQ3 304 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 PRAMEF33A0A0G2JMD5 474 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 A0A0G2JNG1 304 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 LOC285095A0A1B0GVY8 99 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 HACD1B0YJ81 288 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 GPR89AB7ZAQ6 455 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 KIR2DS3K7RE56 304 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 PRAMEF10O60809 474 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 EML2O95834 649 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 GPR89BP0CG08 455 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 LIPCP11150 499 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 CCL4P13236 92 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 PECAM1P16284 738 aaPredicted RBP12.6□□□□□ -0.39
PTPRF-214ENST00000496043 BPIP17213 487 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 CD82P27701 267 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 CSTF2P33240 577 aaKnown RBP eCLIP12.6□□□□□ -0.39
PTPRF-214ENST00000496043 CD68P34810 354 aaPredicted RBP12.6□□□□□ -0.39
PTPRF-214ENST00000496043 WNT3AP56704 352 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 COPS2P61201 443 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 HHEXQ03014 270 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 ADCY2Q08462 1091 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 KIR2DS5Q14953 304 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.6□□□□□ -0.39
PTPRF-214ENST00000496043 C11orf63Q6NUN7 778 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 ADGRG6Q86SQ4 1221 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 DAAM2Q86T65 1068 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 TMTC1Q8IUR5 882 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 AGBL5Q8NDL9 886 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 RCBTB1Q8NDN9 531 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 HTR3CQ8WXA8 447 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 GLYATL1Q969I3 302 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 CCDC74BQ96LY2 380 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 FCRL5Q96RD9 977 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 TAAR9Q96RI9 348 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 HERPUD2Q9BSE4 406 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.6□□□□□ -0.39
PTPRF-214ENST00000496043 GOLPH3Q9H4A6 298 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 TRABDQ9H4I3 376 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 ARFGAP3Q9NP61 516 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 SARS2Q9NP81 518 aaKnown RBP12.6□□□□□ -0.39
PTPRF-214ENST00000496043 KLC4Q9NSK0 619 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 KLHL8Q9P2G9 620 aaPredicted RBP12.6□□□□□ -0.39
PTPRF-214ENST00000496043 NFKBIL1Q9UBC1 381 aaPredicted RBP12.6□□□□□ -0.39
PTPRF-214ENST00000496043 TRHDEQ9UKU6 1024 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 TFR2Q9UP52 801 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 NBEAQ8NFP9 2946 aa12.6□□□□□ -0.39
PTPRF-214ENST00000496043 C9orf172C9J069 976 aa12.59□□□□□ -0.39
PTPRF-214ENST00000496043 CHUKO15111 745 aa12.59□□□□□ -0.39
PTPRF-214ENST00000496043 KMOO15229 486 aa12.59□□□□□ -0.39
PTPRF-214ENST00000496043 EFSO43281 561 aa12.59□□□□□ -0.39
PTPRF-214ENST00000496043 VEGFDO43915 354 aa12.59□□□□□ -0.39
PTPRF-214ENST00000496043 CDK14O94921 469 aa12.59□□□□□ -0.39
PTPRF-214ENST00000496043 IPO7O95373 1038 aaKnown RBP12.59□□□□□ -0.39
PTPRF-214ENST00000496043 SLC4A1P02730 911 aa12.59□□□□□ -0.39
PTPRF-214ENST00000496043 PRB1P04280 392 aa12.59□□□□□ -0.39
PTPRF-214ENST00000496043 F3P13726 295 aa12.59□□□□□ -0.39
PTPRF-214ENST00000496043 NFKB1P19838 968 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms