RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 CWF19L1Q69YN2 538 aaKnown RBP10.2□□□□□ -0.78
HDAC3-214ENST00000495485 DSG4Q86SJ6 1040 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 ADIPOR2Q86V24 386 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 C10orf107Q8IVU9 208 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 FANCMQ8IYD8 2048 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 RBFAQ8N0V3 343 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 FSTL5Q8N475 847 aaPredicted RBP10.2□□□□□ -0.78
HDAC3-214ENST00000495485 SPEM1Q8N4L4 309 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 NAT16Q8N8M0 369 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 FLCNQ8NFG4 579 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 KCTD4Q8WVF5 259 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 CCT6BQ92526 530 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 NXNL1Q96CM4 212 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 ECHDC3Q96DC8 303 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 CNDP1Q96KN2 507 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 MECRQ9BV79 373 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 CLPBQ9H078 707 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 ILKAPQ9H0C8 392 aaPredicted RBP10.2□□□□□ -0.78
HDAC3-214ENST00000495485 SUDS3Q9H7L9 328 aaPredicted RBP10.2□□□□□ -0.78
HDAC3-214ENST00000495485 FBRSQ9HAH7 460 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 TXLNGQ9NUQ3 528 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 MRGBPQ9NV56 204 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 OXSMQ9NWU1 459 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 VTI1BQ9UEU0 232 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 SUN2Q9UH99 717 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 FKBPLQ9UIM3 349 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 EMCNQ9ULC0 261 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.2□□□□□ -0.78
HDAC3-214ENST00000495485 CRYL1Q9Y2S2 319 aa10.2□□□□□ -0.78
HDAC3-214ENST00000495485 RRP15Q9Y3B9 282 aaKnown RBP10.2□□□□□ -0.78
HDAC3-214ENST00000495485 VPS13AQ96RL7 3174 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 CCDC163A0A0D9SF12 145 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 A0A0G2JND7 137 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 GLYATL1P3A0A0U1RQE8 302 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 RGSL1A5PLK6 1076 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 TBC1D3BA6NDS4 549 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 OR51F1A6NGY5 319 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 SHISA7A6NL88 538 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 H0YHG0 523 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 PRMT5O14744 637 aaPredicted RBP10.19□□□□□ -0.78
HDAC3-214ENST00000495485 NPHS1O60500 1241 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 CISD3P0C7P0 127 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 FGF3P11487 239 aaPredicted RBP10.19□□□□□ -0.78
HDAC3-214ENST00000495485 HNRNPLP14866 589 aaKnown RBP eCLIP10.19□□□□□ -0.78
HDAC3-214ENST00000495485 CTPS1P17812 591 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 KCNA4P22459 653 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 RPS3P23396 243 aaKnown RBP eCLIP10.19□□□□□ -0.78
HDAC3-214ENST00000495485 AVPR2P30518 371 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 HOXA6P31267 233 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 FMO4P31512 558 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 HNF1BP35680 557 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 CTSOP43234 321 aaPredicted RBP10.19□□□□□ -0.78
HDAC3-214ENST00000495485 ABCG1P45844 678 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 STK19P49842 368 aaPredicted RBP10.19□□□□□ -0.78
HDAC3-214ENST00000495485 IRF9Q00978 393 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 PRKAA1Q13131 559 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 ZNF528Q3MIS6 628 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 SDE2Q6IQ49 451 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 ERAP2Q6P179 960 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 TXNDC11Q6PKC3 985 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 DPY19L3Q6ZPD9 716 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 LYSMD3Q7Z3D4 306 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 PIWIL4Q7Z3Z4 852 aaKnown RBP10.19□□□□□ -0.78
HDAC3-214ENST00000495485 CEP97Q8IW35 865 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 PLD6Q8N2A8 252 aaKnown RBP10.19□□□□□ -0.78
HDAC3-214ENST00000495485 PHTF2Q8N3S3 785 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 RHEBL1Q8TAI7 183 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 STAG3L4Q8TBR4 150 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 DTX3LQ8TDB6 740 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 HEXDCQ8WVB3 486 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 C10orf82Q8WW14 230 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 PPP1R16AQ96I34 528 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 FAR2Q96K12 515 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 UBXN10Q96LJ8 280 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 PLEKHG4BQ96PX9 1271 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 TFB2MQ9H5Q4 396 aaKnown RBP10.19□□□□□ -0.78
HDAC3-214ENST00000495485 ASB8Q9H765 288 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 LMAN1LQ9HAT1 526 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 POLR3BQ9NW08 1133 aaPredicted RBP10.19□□□□□ -0.78
HDAC3-214ENST00000495485 ELOVL2Q9NXB9 296 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 MARCH4Q9P2E8 410 aaPredicted RBP10.19□□□□□ -0.78
HDAC3-214ENST00000495485 DKK3Q9UBP4 350 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 IL36AQ9UHA7 158 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 CRLS1Q9UJA2 301 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 TRMT6Q9UJA5 497 aaKnown RBP10.19□□□□□ -0.78
HDAC3-214ENST00000495485 GNPTGQ9UJJ9 305 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 ZFP69BQ9UJL9 534 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 FBXO4Q9UKT5 387 aa10.19□□□□□ -0.78
HDAC3-214ENST00000495485 GOLGA8QA0A0J9YX86 632 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 EDDM13A0A1B0GTR0 161 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 GOLGA8OA6NCC3 632 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 CFAP99D6REC4 459 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 GOLGA8NF8WBI6 632 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 G3V2L1 256 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 QSOX1O00391 747 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 AURKAO14965 403 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 KPNA5O15131 536 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 ZNF821O75541 412 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-214ENST00000495485 CLDN7O95471 211 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 UGT2B4P06133 528 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms