RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CLCA4Q14CN2 919 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 SNAP47Q5SQN1 464 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 ANKS6Q68DC2 871 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 H2AFVQ71UI9 128 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 CTNNBL1Q8WYA6 563 aaPredicted RBP23■■□□□ 1.27
COL27A1-208ENST00000494780 LDHAL6BQ9BYZ2 381 aaPredicted RBP23■■□□□ 1.27
COL27A1-208ENST00000494780 CARD9Q9H257 536 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 ADNPQ9H2P0 1102 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 OR5K4A6NMS3 321 aa22.99■■□□□ 1.27
COL27A1-208ENST00000494780 TERTO14746 1132 aaKnown RBP22.99■■□□□ 1.27
COL27A1-208ENST00000494780 CAPN5O15484 640 aaPredicted RBP22.99■■□□□ 1.27
COL27A1-208ENST00000494780 SUV39H1O43463 412 aa22.99■■□□□ 1.27
COL27A1-208ENST00000494780 NUAK1O60285 661 aa22.99■■□□□ 1.27
COL27A1-208ENST00000494780 F3P13726 295 aa22.99■■□□□ 1.27
COL27A1-208ENST00000494780 MAN1A1P33908 653 aa22.99■■□□□ 1.27
COL27A1-208ENST00000494780 NFKB2Q00653 900 aa22.99■■□□□ 1.27
COL27A1-208ENST00000494780 MC2RQ01718 297 aa22.99■■□□□ 1.27
COL27A1-208ENST00000494780 PPIDQ08752 370 aaKnown RBP22.99■■□□□ 1.27
COL27A1-208ENST00000494780 ZFYVE27Q5T4F4 411 aa22.99■■□□□ 1.27
COL27A1-208ENST00000494780 BORAQ6PGQ7 559 aa22.99■■□□□ 1.27
COL27A1-208ENST00000494780 AVL9Q8NBF6 648 aa22.99■■□□□ 1.27
COL27A1-208ENST00000494780 NCSTNQ92542 709 aa22.99■■□□□ 1.27
COL27A1-208ENST00000494780 RNF157Q96PX1 679 aa22.99■■□□□ 1.27
COL27A1-208ENST00000494780 SLC25A18Q9H1K4 315 aa22.99■■□□□ 1.27
COL27A1-208ENST00000494780 EPB41L1Q9H4G0 881 aa22.99■■□□□ 1.27
COL27A1-208ENST00000494780 IL17BQ9UHF5 180 aa22.99■■□□□ 1.27
COL27A1-208ENST00000494780 PILRAQ9UKJ1 303 aa22.99■■□□□ 1.27
COL27A1-208ENST00000494780 A8MU76 341 aa22.98■■□□□ 1.27
COL27A1-208ENST00000494780 KCNK1O00180 336 aa22.98■■□□□ 1.27
COL27A1-208ENST00000494780 GRID2O43424 1007 aa22.98■■□□□ 1.27
COL27A1-208ENST00000494780 KDELR1P24390 212 aa22.98■■□□□ 1.27
COL27A1-208ENST00000494780 HNRNPH3P31942 346 aaKnown RBP22.98■■□□□ 1.27
COL27A1-208ENST00000494780 CLCNKAP51800 687 aa22.98■■□□□ 1.27
COL27A1-208ENST00000494780 IFI35P80217 286 aaPredicted RBP22.98■■□□□ 1.27
COL27A1-208ENST00000494780 CNTD1Q8N815 330 aa22.98■■□□□ 1.27
COL27A1-208ENST00000494780 RTP4Q96DX8 246 aa22.98■■□□□ 1.27
COL27A1-208ENST00000494780 ZPBPQ9BS86 351 aa22.98■■□□□ 1.27
COL27A1-208ENST00000494780 SPRY4Q9C004 299 aa22.98■■□□□ 1.27
COL27A1-208ENST00000494780 FBXO8Q9NRD0 319 aa22.98■■□□□ 1.27
COL27A1-208ENST00000494780 SYCE3A1L190 88 aa22.97■■□□□ 1.27
COL27A1-208ENST00000494780 ZNF891A8MT65 544 aaPredicted RBP22.97■■□□□ 1.27
COL27A1-208ENST00000494780 GOLGA6L19H0YKK7 550 aa22.97■■□□□ 1.27
COL27A1-208ENST00000494780 SNX2O60749 519 aa22.97■■□□□ 1.27
COL27A1-208ENST00000494780 MAP4P27816 1152 aaKnown RBP22.97■■□□□ 1.27
COL27A1-208ENST00000494780 CASP14P31944 242 aa22.97■■□□□ 1.27
COL27A1-208ENST00000494780 ZBTB17Q13105 803 aa22.97■■□□□ 1.27
COL27A1-208ENST00000494780 CEACAM20Q6UY09 585 aa22.97■■□□□ 1.27
COL27A1-208ENST00000494780 PHYKPLQ8IUZ5 450 aa22.97■■□□□ 1.27
COL27A1-208ENST00000494780 NLGN4XQ8N0W4 816 aa22.97■■□□□ 1.27
COL27A1-208ENST00000494780 NLGN4YQ8NFZ3 816 aaPredicted RBP22.97■■□□□ 1.27
COL27A1-208ENST00000494780 RAPGEF5Q92565 580 aa22.97■■□□□ 1.27
COL27A1-208ENST00000494780 CATSPER2Q96P56 530 aa22.97■■□□□ 1.27
COL27A1-208ENST00000494780 PACSIN1Q9BY11 444 aa22.97■■□□□ 1.27
COL27A1-208ENST00000494780 TRIM4Q9C037 500 aa22.97■■□□□ 1.27
COL27A1-208ENST00000494780 ZFYVE1Q9HBF4 777 aa22.97■■□□□ 1.27
COL27A1-208ENST00000494780 ATXN10Q9UBB4 475 aa22.97■■□□□ 1.27
COL27A1-208ENST00000494780 ZNF487B1APH4 448 aa22.96■■□□□ 1.27
COL27A1-208ENST00000494780 GPR89AB7ZAQ6 455 aa22.96■■□□□ 1.27
COL27A1-208ENST00000494780 GPR89BP0CG08 455 aa22.96■■□□□ 1.27
COL27A1-208ENST00000494780 ZNF8P17098 575 aaPredicted RBP22.96■■□□□ 1.27
COL27A1-208ENST00000494780 SLC18A3Q16572 532 aa22.96■■□□□ 1.27
COL27A1-208ENST00000494780 ZNF569Q5MCW4 686 aa22.96■■□□□ 1.27
COL27A1-208ENST00000494780 PLD5Q8N7P1 536 aa22.96■■□□□ 1.27
COL27A1-208ENST00000494780 EID2BQ96D98 161 aa22.96■■□□□ 1.27
COL27A1-208ENST00000494780 SLC45A3Q96JT2 553 aa22.96■■□□□ 1.27
COL27A1-208ENST00000494780 TRIB3Q96RU7 358 aa22.96■■□□□ 1.27
COL27A1-208ENST00000494780 ZSCAN5AQ9BUG6 496 aa22.96■■□□□ 1.27
COL27A1-208ENST00000494780 EFHD1Q9BUP0 239 aa22.96■■□□□ 1.27
COL27A1-208ENST00000494780 SPATA16Q9BXB7 569 aa22.96■■□□□ 1.27
COL27A1-208ENST00000494780 TRIM39Q9HCM9 518 aa22.96■■□□□ 1.27
COL27A1-208ENST00000494780 RAD18Q9NS91 495 aa22.96■■□□□ 1.27
COL27A1-208ENST00000494780 CPNE7Q9UBL6 633 aa22.96■■□□□ 1.27
COL27A1-208ENST00000494780 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.96■■□□□ 1.274e-7■■■□□ 14.6
COL27A1-208ENST00000494780 ADGRG1Q9Y653 693 aa22.96■■□□□ 1.27
COL27A1-208ENST00000494780 LILRA5A6NI73 299 aa22.95■■□□□ 1.26
COL27A1-208ENST00000494780 MAPK9P45984 424 aa22.95■■□□□ 1.26
COL27A1-208ENST00000494780 DCDC1P59894 354 aa22.95■■□□□ 1.26
COL27A1-208ENST00000494780 GALNT3Q14435 633 aa22.95■■□□□ 1.26
COL27A1-208ENST00000494780 VSIG1Q86XK7 387 aa22.95■■□□□ 1.26
COL27A1-208ENST00000494780 PLXDC1Q8IUK5 500 aa22.95■■□□□ 1.26
COL27A1-208ENST00000494780 KIAA1143Q96AT1 154 aaPredicted RBP22.95■■□□□ 1.26
COL27A1-208ENST00000494780 IMP4Q96G21 291 aaKnown RBP22.95■■□□□ 1.26
COL27A1-208ENST00000494780 CTRCQ99895 268 aa22.95■■□□□ 1.26
COL27A1-208ENST00000494780 OR2AG1Q9H205 316 aa22.95■■□□□ 1.26
COL27A1-208ENST00000494780 GPN2Q9H9Y4 310 aaPredicted RBP22.95■■□□□ 1.26
COL27A1-208ENST00000494780 UCK1Q9HA47 277 aa22.95■■□□□ 1.26
COL27A1-208ENST00000494780 MAGEE1Q9HCI5 957 aa22.95■■□□□ 1.26
COL27A1-208ENST00000494780 PRDM8Q9NQV8 689 aa22.95■■□□□ 1.26
COL27A1-208ENST00000494780 IFNKQ9P0W0 207 aa22.95■■□□□ 1.26
COL27A1-208ENST00000494780 NFKBIL1Q9UBC1 381 aaPredicted RBP22.95■■□□□ 1.26
COL27A1-208ENST00000494780 TUBD1Q9UJT1 453 aa22.95■■□□□ 1.26
COL27A1-208ENST00000494780 HEY1Q9Y5J3 304 aa22.95■■□□□ 1.26
COL27A1-208ENST00000494780 LRRD1A4D1F6 860 aa22.94■■□□□ 1.26
COL27A1-208ENST00000494780 SLC25A14O95258 325 aaPredicted RBP22.94■■□□□ 1.26
COL27A1-208ENST00000494780 CCR10P46092 362 aa22.94■■□□□ 1.26
COL27A1-208ENST00000494780 POLE2P56282 527 aa22.94■■□□□ 1.26
COL27A1-208ENST00000494780 UBE2IP63279 158 aaKnown RBP22.94■■□□□ 1.26
COL27A1-208ENST00000494780 PDPK2PQ6A1A2 396 aa22.94■■□□□ 1.26
COL27A1-208ENST00000494780 SLC9A4Q6AI14 798 aa22.94■■□□□ 1.26
COL27A1-208ENST00000494780 TRAM1L1Q8N609 369 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms