RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 DNALI1O14645 258 aaPredicted RBP11.02□□□□□ -0.65
APTX-230ENST00000494649 TNFP01375 233 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 ZNF8P17098 575 aaPredicted RBP11.02□□□□□ -0.65
APTX-230ENST00000494649 KELP23276 732 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 IVDP26440 423 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 NMBRP28336 390 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 AKT1P31749 480 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 RXRGP48443 463 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 NOVA1P51513 510 aaKnown RBP11.02□□□□□ -0.65
APTX-230ENST00000494649 DNAJC3Q13217 504 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 TRADDQ15628 312 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 SLC30A9Q6PML9 568 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 TAS2R42Q7RTR8 314 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 LDB1Q86U70 411 aaPredicted RBP11.02□□□□□ -0.65
APTX-230ENST00000494649 PHYKPLQ8IUZ5 450 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 PPIL6Q8IXY8 311 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 AGGF1Q8N302 714 aaeCLIP11.02□□□□□ -0.65
APTX-230ENST00000494649 OXR1Q8N573 874 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 SLCO2A1Q92959 643 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 HDAC10Q969S8 669 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 MFSD3Q96ES6 412 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 CDKN2AIPNLQ96HQ2 116 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 NLE1Q9NVX2 485 aaPredicted RBP11.02□□□□□ -0.65
APTX-230ENST00000494649 BFARQ9NZS9 450 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 CRLS1Q9UJA2 301 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 DOLKQ9UPQ8 538 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 TCAF1Q9Y4C2 921 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 MAD1L1Q9Y6D9 718 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 WDFY3Q8IZQ1 3526 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 ESYT3A0FGR9 886 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 CCDC162PA2VCL2 907 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 PCDHGA12O60330 932 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 ACP5P13686 325 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 ADRA1DP25100 572 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 RPL21P46778 160 aaKnown RBP11.01□□□□□ -0.65
APTX-230ENST00000494649 ID4P47928 161 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 LIMK1P53667 647 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 ITGA8P53708 1063 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 PDE1BQ01064 536 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 CKAP4Q07065 602 aaKnown RBP11.01□□□□□ -0.65
APTX-230ENST00000494649 NFATC2Q13469 925 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 SUZ12Q15022 739 aaKnown RBP11.01□□□□□ -0.65
APTX-230ENST00000494649 FNBP1LQ5T0N5 605 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 GPRC6AQ5T6X5 926 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 TSTD2Q5T7W7 516 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 TAF8Q7Z7C8 310 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 ADGRG6Q86SQ4 1221 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 BEND7Q8N7W2 519 aaPredicted RBP11.01□□□□□ -0.65
APTX-230ENST00000494649 OR6P1Q8NGX9 317 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 STYXQ8WUJ0 223 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 TTC25Q96NG3 672 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 BOCQ9BWV1 1114 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 RAD18Q9NS91 495 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 SPASTQ9UBP0 616 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 PCOLCE2Q9UKZ9 415 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 KCNK6Q9Y257 313 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 SLC17A4Q9Y2C5 497 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 DNAJC16Q9Y2G8 782 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 SLC30A1Q9Y6M5 507 aa11.01□□□□□ -0.65
APTX-230ENST00000494649 CNOT1A5YKK6 2376 aaKnown RBP11.01□□□□□ -0.65
APTX-230ENST00000494649 TOR1BO14657 336 aa11□□□□□ -0.65
APTX-230ENST00000494649 TM4SF5O14894 197 aa11□□□□□ -0.65
APTX-230ENST00000494649 YY2O15391 372 aa11□□□□□ -0.65
APTX-230ENST00000494649 FLRT2O43155 660 aa11□□□□□ -0.65
APTX-230ENST00000494649 SIGLEC6O43699 453 aa11□□□□□ -0.65
APTX-230ENST00000494649 DFNA5O60443 496 aa11□□□□□ -0.65
APTX-230ENST00000494649 DNAJC6O75061 913 aa11□□□□□ -0.65
APTX-230ENST00000494649 CDK14O94921 469 aa11□□□□□ -0.65
APTX-230ENST00000494649 GOT2P00505 430 aaKnown RBP11□□□□□ -0.65
APTX-230ENST00000494649 GIMD1P0DJR0 217 aa11□□□□□ -0.65
APTX-230ENST00000494649 PBLDP30039 288 aaPredicted RBP11□□□□□ -0.65
APTX-230ENST00000494649 DEKP35659 375 aaKnown RBP11□□□□□ -0.65
APTX-230ENST00000494649 HADHAP40939 763 aa11□□□□□ -0.65
APTX-230ENST00000494649 BLKP51451 505 aa11□□□□□ -0.65
APTX-230ENST00000494649 SARNPP82979 210 aaKnown RBP11□□□□□ -0.65
APTX-230ENST00000494649 DHX34Q14147 1143 aaKnown RBP11□□□□□ -0.65
APTX-230ENST00000494649 MSS51Q4VC12 460 aa11□□□□□ -0.65
APTX-230ENST00000494649 PCID2Q5JVF3 399 aa11□□□□□ -0.65
APTX-230ENST00000494649 DNTTIP2Q5QJE6 756 aaKnown RBP11□□□□□ -0.65
APTX-230ENST00000494649 KANSL1Q7Z3B3 1105 aa11□□□□□ -0.65
APTX-230ENST00000494649 NLRP8Q86W28 1048 aa11□□□□□ -0.65
APTX-230ENST00000494649 GALNT13Q8IUC8 556 aa11□□□□□ -0.65
APTX-230ENST00000494649 TRAPPC5Q8IUR0 188 aa11□□□□□ -0.65
APTX-230ENST00000494649 PIANPQ8IYJ0 282 aa11□□□□□ -0.65
APTX-230ENST00000494649 NOA1Q8NC60 698 aaKnown RBP11□□□□□ -0.65
APTX-230ENST00000494649 LRRC1Q9BTT6 524 aa11□□□□□ -0.65
APTX-230ENST00000494649 CDH19Q9H159 772 aa11□□□□□ -0.65
APTX-230ENST00000494649 LRP4O75096 1905 aa11□□□□□ -0.65
APTX-230ENST00000494649 ASPMQ8IZT6 3477 aa11□□□□□ -0.65
APTX-230ENST00000494649 TRBV23OR9-2A0A075B6M9 112 aa11□□□□□ -0.65
APTX-230ENST00000494649 B4DGG1 531 aa11□□□□□ -0.65
APTX-230ENST00000494649 KIF2AO00139 706 aaPredicted RBP11□□□□□ -0.65
APTX-230ENST00000494649 CASC3O15234 703 aaKnown RBP11□□□□□ -0.65
APTX-230ENST00000494649 PPFIA2O75334 1257 aa11□□□□□ -0.65
APTX-230ENST00000494649 PYGLP06737 847 aa11□□□□□ -0.65
APTX-230ENST00000494649 ZNF883P0CG24 379 aa11□□□□□ -0.65
APTX-230ENST00000494649 ITGALP20701 1170 aa11□□□□□ -0.65
APTX-230ENST00000494649 GRK6P43250 576 aa11□□□□□ -0.65
APTX-230ENST00000494649 MAGEA6P43360 314 aa11□□□□□ -0.65
APTX-230ENST00000494649 CTSCP53634 463 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms