RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 HERC3Q15034 1050 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 MYLK3Q32MK0 819 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 CARD16Q5EG05 197 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 C9orf50Q5SZB4 431 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 TMEM198Q66K66 360 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 TMEM215Q68D42 235 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 CERS6Q6ZMG9 384 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 DPY19L3Q6ZPD9 716 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 USP45Q70EL2 814 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 TAS2R42Q7RTR8 314 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 SNX20Q7Z614 316 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 SERPINA9Q86WD7 417 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 RBFAQ8N0V3 343 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 AHI1Q8N157 1196 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 PELI3Q8N2H9 469 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 AFAP1L2Q8N4X5 818 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 NKAPQ8N5F7 415 aaKnown RBP10.57□□□□□ -0.72
CLCN6-208ENST00000494028 CPSF7Q8N684 471 aaKnown RBP10.57□□□□□ -0.72
CLCN6-208ENST00000494028 PAF1Q8N7H5 531 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 CHST14Q8NCH0 376 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 FUBP1Q96AE4 644 aaKnown RBP10.57□□□□□ -0.72
CLCN6-208ENST00000494028 MCUR1Q96AQ8 359 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 ASIC4Q96FT7 647 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 MARK4Q96L34 752 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 MRGPRX3Q96LB0 322 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 CATSPER2Q96P56 530 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 BOCQ9BWV1 1114 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 LINC00597Q9H2U6 94 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 DENND2DQ9H6A0 471 aaPredicted RBP10.57□□□□□ -0.72
CLCN6-208ENST00000494028 MEAF6Q9HAF1 191 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 EML4Q9HC35 981 aaKnown RBP10.57□□□□□ -0.72
CLCN6-208ENST00000494028 HECAQ9UBI9 543 aaPredicted RBP10.57□□□□□ -0.72
CLCN6-208ENST00000494028 RNF112Q9ULX5 631 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 PPIL1Q9Y3C6 166 aa10.57□□□□□ -0.72
CLCN6-208ENST00000494028 BPTFQ12830 3046 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 GLYATL1P3A0A0U1RQE8 302 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 CCDC189A1A4V9 331 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 TRPC5OSA6NMA1 111 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 IQCF5A8MTL0 148 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 STX16-NPEPL1H3BU86 382 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 STX16O14662 325 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 ZNF197O14709 1029 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 PER2O15055 1255 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 CHUKO15111 745 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 TRIM24O15164 1050 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 HOXC11O43248 304 aaPredicted RBP10.56□□□□□ -0.72
CLCN6-208ENST00000494028 SIX3O95343 332 aaPredicted RBP10.56□□□□□ -0.72
CLCN6-208ENST00000494028 UGT2B4P06133 528 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 COX4I1P13073 169 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 GFAPP14136 432 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 TSPAN8P19075 237 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 ITGAXP20702 1163 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 ACRV1P26436 265 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 EEF1DP29692 281 aaKnown RBP10.56□□□□□ -0.72
CLCN6-208ENST00000494028 PGM1P36871 562 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 HK3P52790 923 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 ERVK-21P61565 698 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 ECT2LQ008S8 904 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 GPM6BQ13491 265 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 CHRNA6Q15825 494 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 GEN1Q17RS7 908 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 LRRC66Q68CR7 880 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 GRAMD4Q6IC98 578 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 PDE12Q6L8Q7 609 aaKnown RBP10.56□□□□□ -0.72
CLCN6-208ENST00000494028 CRTC1Q6UUV9 634 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 CYHR1Q6ZMK1 362 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 TPRG1Q6ZUI0 275 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 RAB44Q7Z6P3 723 aaPredicted RBP10.56□□□□□ -0.72
CLCN6-208ENST00000494028 C12orf40Q86WS4 652 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 TMPRSS6Q8IU80 811 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 ULK2Q8IYT8 1036 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 KIRREL3Q8IZU9 778 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 ARHGAP24Q8N264 748 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 CBARPQ8N350 705 aaPredicted RBP10.56□□□□□ -0.72
CLCN6-208ENST00000494028 FBXO39Q8N4B4 442 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 ZNF483Q8TF39 744 aaPredicted RBP10.56□□□□□ -0.72
CLCN6-208ENST00000494028 FRS2Q8WU20 508 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 MYLIPQ8WY64 445 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 SMG7Q92540 1137 aaKnown RBP10.56□□□□□ -0.72
CLCN6-208ENST00000494028 NSUN5Q96P11 429 aaKnown RBP10.56□□□□□ -0.72
CLCN6-208ENST00000494028 C1QTNF3Q9BXJ4 246 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 SLC2A11Q9BYW1 496 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 CPEB1Q9BZB8 566 aaKnown RBP10.56□□□□□ -0.72
CLCN6-208ENST00000494028 C1orf21Q9H246 121 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 SUV39H2Q9H5I1 410 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 RNPEPL1Q9HAU8 725 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 IL26Q9NPH9 171 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 GNPTGQ9UJJ9 305 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 APPL1Q9UKG1 709 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 ERVW-1Q9UQF0 538 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 YBX2Q9Y2T7 364 aaKnown RBP10.56□□□□□ -0.72
CLCN6-208ENST00000494028 FIS1Q9Y3D6 152 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 MRPS23Q9Y3D9 190 aaKnown RBP10.56□□□□□ -0.72
CLCN6-208ENST00000494028 COPG1Q9Y678 874 aaKnown RBP10.56□□□□□ -0.72
CLCN6-208ENST00000494028 PRSS21Q9Y6M0 314 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 WASF2Q9Y6W5 498 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 DOCK8Q8NF50 2099 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 CEP290O15078 2479 aa10.56□□□□□ -0.72
CLCN6-208ENST00000494028 SYCE1LA8MT33 242 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 AGAP14A8MT82 685 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms