RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 FDPSP14324 419 aaKnown RBP6.13□□□□□ -1.43
SMC2-205ENST00000493955 ERCC2P18074 760 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 ENTPD1P49961 510 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 DDR1Q08345 913 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 RALGDSQ12967 914 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 CTTNQ14247 550 aaKnown RBP6.13□□□□□ -1.43
SMC2-205ENST00000493955 TNIP1Q15025 636 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 NSUN5P2Q63ZY6 315 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 FRG2Q64ET8 278 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 TMEM211Q6ICI0 200 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 Q6ZSV7 163 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 INTS8Q75QN2 995 aaKnown RBP6.13□□□□□ -1.43
SMC2-205ENST00000493955 ADIPOR2Q86V24 386 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 CEP57Q86XR8 500 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 C7orf57Q8NEG2 295 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 PIGOQ8TEQ8 1089 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 ADAMTS14Q8WXS8 1223 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 SECISBP2LQ93073 1101 aaKnown RBP6.13□□□□□ -1.43
SMC2-205ENST00000493955 ARSGQ96EG1 525 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 ZNF830Q96NB3 372 aaPredicted RBP6.13□□□□□ -1.43
SMC2-205ENST00000493955 SLC25A23Q9BV35 468 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 GPR88Q9GZN0 384 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 PPIL3Q9H2H8 161 aaKnown RBP6.13□□□□□ -1.43
SMC2-205ENST00000493955 WDR26Q9H7D7 661 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 NRIP3Q9NQ35 241 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 OLAHQ9NV23 265 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 HEY2Q9UBP5 337 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 DDX25Q9UHL0 483 aaKnown RBP6.13□□□□□ -1.43
SMC2-205ENST00000493955 SQORQ9Y6N5 450 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 CCDC180Q9P1Z9 1646 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 EDDM13A0A1B0GTR0 161 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 H0Y626 953 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 IPO8O15397 1037 aaKnown RBP6.12□□□□□ -1.43
SMC2-205ENST00000493955 HSPA12AO43301 675 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 ZIC3O60481 467 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 VNN2O95498 520 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 FSHBP01225 129 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 CCR10P46092 362 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 RAB28P51157 221 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 PPP2R2BQ00005 443 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 SRSF1Q07955 248 aaKnown RBP eCLIP6.12□□□□□ -1.43
SMC2-205ENST00000493955 FOXM1Q08050 763 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 EFNB3Q15768 340 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 HYAL4Q2M3T9 481 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 MYLK3Q32MK0 819 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 FAM98BQ52LJ0 330 aaKnown RBP6.12□□□□□ -1.43
SMC2-205ENST00000493955 MANEAQ5SRI9 462 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 DCST1Q5T197 706 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 ARMC4Q5T2S8 1044 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 KCTD18Q6PI47 426 aaPredicted RBP6.12□□□□□ -1.43
SMC2-205ENST00000493955 TRAT1Q6PIZ9 186 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 ZNF367Q7RTV3 350 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 PRIMA1Q86XR5 153 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 AFAP1Q8N556 730 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 ARFGAP1Q8N6T3 406 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 PI4KAP1Q8N8J0 262 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 DEPDC1BQ8WUY9 529 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 GRAMD2BQ96HH9 432 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 LINC00615Q96LM1 132 aaPredicted RBP6.12□□□□□ -1.43
SMC2-205ENST00000493955 SPAG5Q96R06 1193 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 SYT17Q9BSW7 474 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 HGH1Q9BTY7 390 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 MMTAG2Q9BU76 263 aaKnown RBP6.12□□□□□ -1.43
SMC2-205ENST00000493955 GOLPH3LQ9H4A5 285 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 IL17BQ9UHF5 180 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 RASAL2Q9UJF2 1139 aa6.12□□□□□ -1.43
SMC2-205ENST00000493955 B4DGG1 531 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 SPRY1O43609 319 aaPredicted RBP6.11□□□□□ -1.43
SMC2-205ENST00000493955 SLCO2B1O94956 709 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 SOX30O94993 753 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 KELP23276 732 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 NR2F2P24468 414 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 CDH13P55290 713 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 C6orf163Q5TEZ5 329 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 DUS1LQ6P1R4 473 aaKnown RBP6.11□□□□□ -1.43
SMC2-205ENST00000493955 PAPD4Q6PIY7 484 aaKnown RBP6.11□□□□□ -1.43
SMC2-205ENST00000493955 SHC4Q6S5L8 630 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 PET117Q6UWS5 81 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 SLC36A4Q6YBV0 504 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 ERN2Q76MJ5 926 aaKnown RBP6.11□□□□□ -1.43
SMC2-205ENST00000493955 CTU1Q7Z7A3 348 aaKnown RBP6.11□□□□□ -1.43
SMC2-205ENST00000493955 PIP4P1Q86T03 277 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 ZC3HC1Q86WB0 502 aaKnown RBP6.11□□□□□ -1.43
SMC2-205ENST00000493955 BEST3Q8N1M1 668 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 TTC30BQ8N4P2 665 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 ORAI1Q96D31 301 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 LRFN5Q96NI6 719 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 NUP85Q9BW27 656 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 FAM234AQ9H0X4 552 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 ANKZF1Q9H8Y5 726 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 CHMP1AQ9HD42 196 aaPredicted RBP6.11□□□□□ -1.43
SMC2-205ENST00000493955 ABCF3Q9NUQ8 709 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 TRNAU1APQ9NX07 287 aaKnown RBP6.11□□□□□ -1.43
SMC2-205ENST00000493955 TRMT1Q9NXH9 659 aaKnown RBP6.11□□□□□ -1.43
SMC2-205ENST00000493955 TSPYL4Q9UJ04 414 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 HS3ST3B1Q9Y662 390 aa6.11□□□□□ -1.43
SMC2-205ENST00000493955 H0YGN5 161 aa6.1□□□□□ -1.43
SMC2-205ENST00000493955 VWA5AO00534 786 aa6.1□□□□□ -1.43
SMC2-205ENST00000493955 SPINT2O43291 252 aa6.1□□□□□ -1.43
SMC2-205ENST00000493955 PLPP2O43688 288 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms