RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 RBMS3Q6XE24 437 aaKnown RBP3.89□□□□□ -1.79
SMC4-223ENST00000493695 LINGO2Q7L985 606 aa3.89□□□□□ -1.79
SMC4-223ENST00000493695 APLFQ8IW19 511 aaPredicted RBP3.89□□□□□ -1.79
SMC4-223ENST00000493695 TNIP2Q8NFZ5 429 aa3.89□□□□□ -1.79
SMC4-223ENST00000493695 NOC3LQ8WTT2 800 aaKnown RBP3.89□□□□□ -1.79
SMC4-223ENST00000493695 ORAI1Q96D31 301 aa3.89□□□□□ -1.79
SMC4-223ENST00000493695 OPRPNQ99935 248 aaPredicted RBP3.89□□□□□ -1.79
SMC4-223ENST00000493695 KRTAP4-3Q9BYR4 195 aa3.89□□□□□ -1.79
SMC4-223ENST00000493695 KCNN2Q9H2S1 579 aa3.89□□□□□ -1.79
SMC4-223ENST00000493695 HINT3Q9NQE9 182 aaKnown RBP3.89□□□□□ -1.79
SMC4-223ENST00000493695 KDM3AQ9Y4C1 1321 aa3.89□□□□□ -1.79
SMC4-223ENST00000493695 KRTAP16-1A8MUX0 517 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 EPB41L2O43491 1005 aaKnown RBP3.88□□□□□ -1.79
SMC4-223ENST00000493695 MT-CYBP00156 380 aaPredicted RBP3.88□□□□□ -1.79
SMC4-223ENST00000493695 CD48P09326 243 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 DDX5P17844 614 aaKnown RBP3.88□□□□□ -1.79
SMC4-223ENST00000493695 MAOAP21397 527 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 RAD23BP54727 409 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 FOXM1Q08050 763 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 NFIL3Q16649 462 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 C2orf68Q2NKX9 166 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 SGO1Q5FBB7 561 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 ZNF667Q5HYK9 610 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 TCTE1Q5JU00 501 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 SPINK14Q6IE38 97 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 FAM53AQ6NSI3 398 aaPredicted RBP3.88□□□□□ -1.79
SMC4-223ENST00000493695 PLD5Q8N7P1 536 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 HUS1BQ8NHY5 278 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 FAM222BQ8WU58 562 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 SLC38A5Q8WUX1 472 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 TAAR8Q969N4 342 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 SH3GL2Q99962 352 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 VGLL1Q99990 258 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 LBHD1Q9BQE6 289 aaPredicted RBP3.88□□□□□ -1.79
SMC4-223ENST00000493695 CDK19Q9BWU1 502 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 POLG2Q9UHN1 485 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 ERVK-11Q9UQG0 969 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.88□□□□□ -1.79
SMC4-223ENST00000493695 PTPRCP08575 1304 aa3.88□□□□□ -1.79
SMC4-223ENST00000493695 F5H0A9 414 aaPredicted RBP3.87□□□□□ -1.79
SMC4-223ENST00000493695 TNFSF14O43557 240 aa3.87□□□□□ -1.79
SMC4-223ENST00000493695 PRKNO60260 465 aaPredicted RBP3.87□□□□□ -1.79
SMC4-223ENST00000493695 CD4P01730 458 aa3.87□□□□□ -1.79
SMC4-223ENST00000493695 DPEP1P16444 411 aa3.87□□□□□ -1.79
SMC4-223ENST00000493695 ZNF26P17031 533 aaPredicted RBP3.87□□□□□ -1.79
SMC4-223ENST00000493695 EPHA8P29322 1005 aaPredicted RBP3.87□□□□□ -1.79
SMC4-223ENST00000493695 RXRGP48443 463 aa3.87□□□□□ -1.79
SMC4-223ENST00000493695 CASP6P55212 293 aa3.87□□□□□ -1.79
SMC4-223ENST00000493695 CDH15P55291 814 aa3.87□□□□□ -1.79
SMC4-223ENST00000493695 RPP30P78346 268 aaKnown RBP3.87□□□□□ -1.79
SMC4-223ENST00000493695 PLIN5Q00G26 463 aa3.87□□□□□ -1.79
SMC4-223ENST00000493695 DDX10Q13206 875 aaKnown RBP3.87□□□□□ -1.79
SMC4-223ENST00000493695 ITGA9Q13797 1035 aa3.87□□□□□ -1.79
SMC4-223ENST00000493695 GPR180Q86V85 440 aa3.87□□□□□ -1.79
SMC4-223ENST00000493695 ARMC8Q8IUR7 673 aa3.87□□□□□ -1.79
SMC4-223ENST00000493695 DHX40Q8IX18 779 aaKnown RBP3.87□□□□□ -1.79
SMC4-223ENST00000493695 ADSSL1Q8N142 457 aa3.87□□□□□ -1.79
SMC4-223ENST00000493695 NFKBIDQ8NI38 313 aa3.87□□□□□ -1.79
SMC4-223ENST00000493695 FCAMRQ8WWV6 532 aa3.87□□□□□ -1.79
SMC4-223ENST00000493695 ZUFSPQ96AP4 578 aa3.87□□□□□ -1.79
SMC4-223ENST00000493695 SLC26A6Q9BXS9 759 aa3.87□□□□□ -1.79
SMC4-223ENST00000493695 TTYH1Q9H313 450 aaPredicted RBP3.87□□□□□ -1.79
SMC4-223ENST00000493695 ZDHHC18Q9NUE0 388 aa3.87□□□□□ -1.79
SMC4-223ENST00000493695 NAALADL1Q9UQQ1 740 aa3.87□□□□□ -1.79
SMC4-223ENST00000493695 TNPO2O14787 897 aaKnown RBP3.86□□□□□ -1.79
SMC4-223ENST00000493695 EGFP01133 1207 aa3.86□□□□□ -1.79
SMC4-223ENST00000493695 NR3C1P04150 777 aa3.86□□□□□ -1.79
SMC4-223ENST00000493695 FAM106CPP0CH98 169 aa3.86□□□□□ -1.79
SMC4-223ENST00000493695 ERVK-10P10266 1014 aa3.86□□□□□ -1.79
SMC4-223ENST00000493695 GGT5P36269 586 aa3.86□□□□□ -1.79
SMC4-223ENST00000493695 ARL1P40616 181 aaPredicted RBP3.86□□□□□ -1.79
SMC4-223ENST00000493695 RPL24P83731 157 aaKnown RBP3.86□□□□□ -1.79
SMC4-223ENST00000493695 EFNB1P98172 346 aa3.86□□□□□ -1.79
SMC4-223ENST00000493695 TDGQ13569 410 aa3.86□□□□□ -1.79
SMC4-223ENST00000493695 SIM2Q14190 667 aaPredicted RBP3.86□□□□□ -1.79
SMC4-223ENST00000493695 HIST2H2ACQ16777 129 aaPredicted RBP3.86□□□□□ -1.79
SMC4-223ENST00000493695 ZNF440Q8IYI8 595 aa3.86□□□□□ -1.79
SMC4-223ENST00000493695 PCDH20Q8N6Y1 951 aaKnown RBP3.86□□□□□ -1.79
SMC4-223ENST00000493695 PAF1Q8N7H5 531 aa3.86□□□□□ -1.79
SMC4-223ENST00000493695 TMEM190Q8WZ59 177 aa3.86□□□□□ -1.79
SMC4-223ENST00000493695 C7orf26Q96N11 449 aa3.86□□□□□ -1.79
SMC4-223ENST00000493695 NR1H4Q96RI1 486 aaPredicted RBP3.86□□□□□ -1.79
SMC4-223ENST00000493695 IWS1Q96ST2 819 aa3.86□□□□□ -1.79
SMC4-223ENST00000493695 TRIM51Q9BSJ1 452 aa3.86□□□□□ -1.79
SMC4-223ENST00000493695 HEMGNQ9BXL5 484 aa3.86□□□□□ -1.79
SMC4-223ENST00000493695 RAD21L1Q9H4I0 556 aa3.86□□□□□ -1.79
SMC4-223ENST00000493695 FGF22Q9HCT0 170 aa3.86□□□□□ -1.79
SMC4-223ENST00000493695 HSPB7Q9UBY9 170 aa3.86□□□□□ -1.79
SMC4-223ENST00000493695 CACNG5Q9UF02 275 aa3.86□□□□□ -1.79
SMC4-223ENST00000493695 KLHL20Q9Y2M5 609 aa3.86□□□□□ -1.79
SMC4-223ENST00000493695 DUXAA6NLW8 204 aa3.85□□□□□ -1.79
SMC4-223ENST00000493695 SH3BP5O60239 455 aa3.85□□□□□ -1.79
SMC4-223ENST00000493695 HEXAP06865 529 aa3.85□□□□□ -1.79
SMC4-223ENST00000493695 GALTP07902 379 aa3.85□□□□□ -1.79
SMC4-223ENST00000493695 COX7A2P14406 83 aa3.85□□□□□ -1.79
SMC4-223ENST00000493695 UFM1P61960 85 aa3.85□□□□□ -1.79
SMC4-223ENST00000493695 CSNK2A1P68400 391 aaPredicted RBP3.85□□□□□ -1.79
SMC4-223ENST00000493695 NAE1Q13564 534 aa3.85□□□□□ -1.79
SMC4-223ENST00000493695 TECRLQ5HYJ1 363 aa3.85□□□□□ -1.79
SMC4-223ENST00000493695 TMEM81Q6P7N7 255 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms