RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 CLEC4EQ9ULY5 219 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 C1orf232A0A0U1RR37 186 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 AZIN1O14977 448 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 OR1I1O60431 355 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 CLASP2O75122 1294 aaKnown RBP10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 VPS4BO75351 444 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 CDK14O94921 469 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 PRAMEF1O95521 474 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 HNRNPA1P09651 372 aaKnown RBP eCLIP10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 ALPIP09923 528 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 GJA1P17302 382 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 CTNNB1P35222 781 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 NUDT2P50583 147 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 GTF2A1P52655 376 aaPredicted RBP10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 TSNQ15631 228 aaKnown RBP10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 CRY1Q16526 586 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 UGT3A2Q3SY77 523 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 C22orf39Q6P5X5 142 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 ECHDC3Q96DC8 303 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 C19orf60Q96EN9 201 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 LINGO1Q96FE5 620 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 TMEM106CQ9BVX2 250 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 NUSAP1Q9BXS6 441 aaKnown RBP10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 CLPBQ9H078 707 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 TLR9Q9NR96 1032 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 NUDT4Q9NZJ9 180 aa10.71□□□□□ -0.69
PHACTR4-204ENST00000493669 BPTFQ12830 3046 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 BTN3A1O00481 513 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 GPC4O75487 556 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 PRAMEF12O95522 483 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 MLYCDO95822 493 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 POU2F2P09086 479 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 CHRM3P20309 590 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 SPAM1P38567 509 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 CCR2P41597 374 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 ACADVLP49748 655 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 CLCN7P51798 805 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 SH3BP2P78314 561 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 STX5Q13190 355 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 NFATC2Q13469 925 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 MYLK3Q32MK0 819 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 DGKKQ5KSL6 1271 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 PLPP4Q5VZY2 271 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 ZDHHC20Q5W0Z9 365 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 TLDC1Q6P9B6 456 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 LARP4Q71RC2 724 aaKnown RBP eCLIP10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 PLPP6Q8IY26 295 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 SIDT2Q8NBJ9 832 aaKnown RBP10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 TTC16Q8NEE8 873 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 GIMAP7Q8NHV1 300 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 ZNF483Q8TF39 744 aaPredicted RBP10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 OTUB2Q96DC9 234 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 ZNF641Q96N77 438 aaPredicted RBP10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 PFDN4Q9NQP4 134 aa10.71□□□□□ -0.7
PHACTR4-204ENST00000493669 SCN8AQ9UQD0 1980 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 NPEPPSL1A6NEC2 478 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 HIDE1A8MVS5 230 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 NRG2O14511 850 aaPredicted RBP10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 GAPDHSO14556 408 aaPredicted RBP10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 TBX10O75333 385 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 EEF1DP29692 281 aaKnown RBP10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 HLA-FP30511 346 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 HNF1BP35680 557 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 CLCQ05315 142 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 PTK2BQ14289 1009 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 USP45Q70EL2 814 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 ADAMTSL2Q86TH1 951 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 SERPINA9Q86WD7 417 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 DSELQ8IZU8 1212 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 CHCHD4Q8N4Q1 142 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 PAF1Q8N7H5 531 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 OR6K2Q8NGY2 324 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 MID1IP1Q9NPA3 183 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 TDP1Q9NUW8 608 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 BCAP29Q9UHQ4 241 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 FIS1Q9Y3D6 152 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 CDC7O00311 574 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 AIM2O14862 343 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 XYLBO75191 536 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 MOSPD3O75425 235 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 FUT11Q495W5 492 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 TMEM240Q5SV17 173 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 ELMSAN1Q6PJG2 1045 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 BNC2Q6ZN30 1099 aaPredicted RBP10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 LRRC74BQ6ZQY2 392 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 TPRG1Q6ZUI0 275 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 RPS27LQ71UM5 84 aaKnown RBP10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 GPSM1Q86YR5 675 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 SPNS2Q8IVW8 549 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 HOMEZQ8IX15 550 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 KIAA1958Q8N8K9 716 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 SPPL3Q8TCT6 385 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 HERVK_113Q902F9 699 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 FAM136AQ96C01 138 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 RCN3Q96D15 328 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 SCRN2Q96FV2 425 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 MCCC1Q96RQ3 725 aaPredicted RBP10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 SLC30A3Q99726 388 aa10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 MRPL40Q9NQ50 206 aaKnown RBP10.7□□□□□ -0.7
PHACTR4-204ENST00000493669 IKZF3Q9UKT9 509 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms