RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 SNX2O60749 519 aa17.46■□□□□ 0.39
NUP50-218ENST00000493456 LRCH4O75427 683 aa17.46■□□□□ 0.39
NUP50-218ENST00000493456 CREG1O75629 220 aa17.46■□□□□ 0.39
NUP50-218ENST00000493456 KIAA0754O94854 1291 aa17.46■□□□□ 0.39
NUP50-218ENST00000493456 MT-ND3P03897 115 aa17.46■□□□□ 0.39
NUP50-218ENST00000493456 ATP1A1P05023 1023 aaKnown RBP17.46■□□□□ 0.39
NUP50-218ENST00000493456 CCNYL3P0C7X3 344 aa17.46■□□□□ 0.39
NUP50-218ENST00000493456 FERP16591 822 aa17.46■□□□□ 0.39
NUP50-218ENST00000493456 GARSP41250 739 aaKnown RBP17.46■□□□□ 0.39
NUP50-218ENST00000493456 CLCNKAP51800 687 aa17.46■□□□□ 0.39
NUP50-218ENST00000493456 UBE2IP63279 158 aaKnown RBP17.46■□□□□ 0.39
NUP50-218ENST00000493456 CYB5D1Q6P9G0 228 aa17.46■□□□□ 0.39
NUP50-218ENST00000493456 RASGRP3Q8IV61 690 aa17.46■□□□□ 0.39
NUP50-218ENST00000493456 SEC14L1Q92503 715 aa17.46■□□□□ 0.39
NUP50-218ENST00000493456 OR6C1Q96RD1 312 aa17.46■□□□□ 0.39
NUP50-218ENST00000493456 POLR1EQ9GZS1 481 aaKnown RBP17.46■□□□□ 0.39
NUP50-218ENST00000493456 TWSG1Q9GZX9 223 aa17.46■□□□□ 0.39
NUP50-218ENST00000493456 ETNK2Q9NVF9 386 aa17.46■□□□□ 0.39
NUP50-218ENST00000493456 LGALS16A8MUM7 142 aa17.45■□□□□ 0.38
NUP50-218ENST00000493456 C21orf140B9A014 251 aa17.45■□□□□ 0.38
NUP50-218ENST00000493456 CA4P22748 312 aa17.45■□□□□ 0.38
NUP50-218ENST00000493456 CASP14P31944 242 aa17.45■□□□□ 0.38
NUP50-218ENST00000493456 PCK1P35558 622 aa17.45■□□□□ 0.38
NUP50-218ENST00000493456 POLNQ7Z5Q5 900 aa17.45■□□□□ 0.38
NUP50-218ENST00000493456 LRRC49Q8IUZ0 686 aa17.45■□□□□ 0.38
NUP50-218ENST00000493456 TEX26Q8N6G2 289 aa17.45■□□□□ 0.38
NUP50-218ENST00000493456 ANKRD20A12PQ8NF67 263 aa17.45■□□□□ 0.38
NUP50-218ENST00000493456 CSPG4P5Q96PW8 444 aa17.45■□□□□ 0.38
NUP50-218ENST00000493456 NUP62CLQ9H1M0 184 aa17.45■□□□□ 0.38
NUP50-218ENST00000493456 CARD9Q9H257 536 aa17.45■□□□□ 0.38
NUP50-218ENST00000493456 NT5MQ9NPB1 228 aa17.45■□□□□ 0.38
NUP50-218ENST00000493456 LNPEPQ9UIQ6 1025 aa17.45■□□□□ 0.38
NUP50-218ENST00000493456 CNOT6Q9ULM6 557 aaKnown RBP17.45■□□□□ 0.38
NUP50-218ENST00000493456 ZNF106Q9H2Y7 1883 aaKnown RBP17.44■□□□□ 0.38
NUP50-218ENST00000493456 PIPSLA2A3N6 862 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 GRID2O43424 1007 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 NUAK1O60285 661 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 UBXN7O94888 489 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 PDGFAP04085 211 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 FGF5P12034 268 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 XRCC1P18887 633 aaPredicted RBP17.44■□□□□ 0.38
NUP50-218ENST00000493456 AMPD1P23109 780 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 CES1P23141 567 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 SH3BP2P78314 561 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 SEMA5AQ13591 1074 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 DNASE1L3Q13609 305 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.44■□□□□ 0.38
NUP50-218ENST00000493456 BOLA3Q53S33 107 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 HENMT1Q5T8I9 393 aaKnown RBP17.44■□□□□ 0.38
NUP50-218ENST00000493456 ALG1LQ6GMV1 187 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 TMEM26Q6ZUK4 368 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 PRSS42Q7Z5A4 293 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 TMEM135Q86UB9 458 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 AOPEPQ8N6M6 819 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 TGM7Q96PF1 710 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 SMIM14Q96QK8 99 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 ERGIC2Q96RQ1 377 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 LYSMD1Q96S90 227 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 SYT11Q9BT88 431 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 TDRD1Q9BXT4 1180 aaKnown RBP17.44■□□□□ 0.38
NUP50-218ENST00000493456 TRIM7Q9C029 511 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 HAUS2Q9NVX0 235 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 OGFRQ9NZT2 677 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 PADI1Q9ULC6 663 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 SCINQ9Y6U3 715 aa17.44■□□□□ 0.38
NUP50-218ENST00000493456 RGSL1A5PLK6 1076 aa17.43■□□□□ 0.38
NUP50-218ENST00000493456 TMCO5BA8MYB1 307 aa17.43■□□□□ 0.38
NUP50-218ENST00000493456 GPR89AB7ZAQ6 455 aa17.43■□□□□ 0.38
NUP50-218ENST00000493456 RASSF9O75901 435 aa17.43■□□□□ 0.38
NUP50-218ENST00000493456 CLDN7O95471 211 aa17.43■□□□□ 0.38
NUP50-218ENST00000493456 GPR89BP0CG08 455 aa17.43■□□□□ 0.38
NUP50-218ENST00000493456 SEPHS1P49903 392 aa17.43■□□□□ 0.38
NUP50-218ENST00000493456 RPL26P61254 145 aaKnown RBP17.43■□□□□ 0.38
NUP50-218ENST00000493456 UBXN1Q04323 297 aa17.43■□□□□ 0.38
NUP50-218ENST00000493456 ITKQ08881 620 aa17.43■□□□□ 0.38
NUP50-218ENST00000493456 SMTNL2Q2TAL5 461 aa17.43■□□□□ 0.38
NUP50-218ENST00000493456 PPP1R3BQ86XI6 285 aa17.43■□□□□ 0.38
NUP50-218ENST00000493456 PLEKHG4BQ96PX9 1271 aa17.43■□□□□ 0.38
NUP50-218ENST00000493456 LHX9Q9NQ69 397 aa17.43■□□□□ 0.38
NUP50-218ENST00000493456 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.43■□□□□ 0.38
NUP50-218ENST00000493456 PKD2L2Q9NZM6 624 aa17.43■□□□□ 0.38
NUP50-218ENST00000493456 RPL26L1Q9UNX3 145 aaKnown RBP17.43■□□□□ 0.38
NUP50-218ENST00000493456 CREBBPQ92793 2442 aa17.43■□□□□ 0.38
NUP50-218ENST00000493456 FADS2P1A8MWK0 482 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 SPAG6O75602 509 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 VIPP01282 170 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 TYRP1P17643 537 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 AMD1P17707 334 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 IL1R2P27930 398 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 CAPZBP47756 277 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 SPINT3P49223 89 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 PGDP52209 483 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 IRF2BP2Q7Z5L9 587 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 TRIM48Q8IWZ4 208 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 CT55Q8WUE5 264 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 THAP4Q8WY91 577 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 HSPH1Q92598 858 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 WDR24Q96S15 920 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 BRD8Q9H0E9 1235 aa17.42■□□□□ 0.38
NUP50-218ENST00000493456 OSGEPL1Q9H4B0 414 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms