RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	C6orf15	Q6UXA7	325 aa	Predicted RBP	13.53	□□□□□ -0.24
SAMM50-204	ENST00000493161	ASB18	Q6ZVZ8	466 aa		13.53	□□□□□ -0.24
SAMM50-204	ENST00000493161	NDUFAF2	Q8N183	169 aa		13.53	□□□□□ -0.24
SAMM50-204	ENST00000493161	LPCAT1	Q8NF37	534 aa		13.53	□□□□□ -0.24
SAMM50-204	ENST00000493161	ANKRD20A12P	Q8NF67	263 aa		13.53	□□□□□ -0.24
SAMM50-204	ENST00000493161	ARRDC2	Q8TBH0	407 aa		13.53	□□□□□ -0.24
SAMM50-204	ENST00000493161	SH3KBP1	Q96B97	665 aa		13.53	□□□□□ -0.24
SAMM50-204	ENST00000493161	BTBD6	Q96KE9	485 aa		13.53	□□□□□ -0.24
SAMM50-204	ENST00000493161	C9orf72	Q96LT7	481 aa		13.53	□□□□□ -0.24
SAMM50-204	ENST00000493161	TGM7	Q96PF1	710 aa		13.53	□□□□□ -0.24
SAMM50-204	ENST00000493161	HERPUD2	Q9BSE4	406 aa		13.53	□□□□□ -0.24
SAMM50-204	ENST00000493161	POLR1E	Q9GZS1	481 aa	Known RBP	13.53	□□□□□ -0.24
SAMM50-204	ENST00000493161	CHMP5	Q9NZZ3	219 aa		13.53	□□□□□ -0.24
SAMM50-204	ENST00000493161	ATXN10	Q9UBB4	475 aa		13.53	□□□□□ -0.24
SAMM50-204	ENST00000493161	TLK1	Q9UKI8	766 aa		13.53	□□□□□ -0.24
SAMM50-204	ENST00000493161	KCTD3	Q9Y597	815 aa		13.53	□□□□□ -0.24
SAMM50-204	ENST00000493161	KIR2DS5	A0A0G2JLQ3	304 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161		A0A0G2JNG1	304 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	CDC14C	A4D256	554 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	KIR2DS3	K7RE56	304 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	GRID2	O43424	1007 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	KIF1C	O43896	1103 aa	Known RBP	13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	NUAK1	O60285	661 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	KATNA1	O75449	491 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	DNAJB5	O75953	348 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	KIAA0754	O94854	1291 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	PYGL	P06737	847 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	ANKRD34C	P0C6C1	535 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	GZMA	P12544	262 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	SKIL	P12757	684 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	ZNF8	P17098	575 aa	Predicted RBP	13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	SPINT3	P49223	89 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	KIR2DS5	Q14953	304 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	ASIC2	Q16515	512 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	ALG1L	Q6GMV1	187 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	TCTN3	Q6NUS6	607 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	PPP1R2P3	Q6NXS1	205 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	RBM43	Q6ZSC3	357 aa	Known RBP	13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	PLXDC1	Q8IUK5	500 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	TEX19	Q8NA77	164 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	MAML1	Q92585	1016 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	EID2B	Q96D98	161 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	OR6C1	Q96RD1	312 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	STN1	Q9H668	368 aa	Known RBP	13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	LRRC4C	Q9HCJ2	640 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	KLC4	Q9NSK0	619 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	LMBRD1	Q9NUN5	540 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	SLC23A2	Q9UGH3	650 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	TTLL3	Q9Y4R7	772 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	GTF3C3	Q9Y5Q9	886 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	ADGRG1	Q9Y653	693 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	SCIN	Q9Y6U3	715 aa		13.52	□□□□□ -0.25
SAMM50-204	ENST00000493161	C1orf232	A0A0U1RR37	186 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	LILRA5	A6NI73	299 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	MKRN2OS	H3BPM6	223 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	GNLY	P22749	145 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	GARS	P41250	739 aa	Known RBP	13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	SLC19A1	P41440	591 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	SLC25A11	Q02978	314 aa	Known RBP	13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	QPCT	Q16769	361 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	PLA2G4E	Q3MJ16	856 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	CRTC3	Q6UUV7	619 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	TMEM26	Q6ZUK4	368 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	CPNE8	Q86YQ8	564 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	CCDC13	Q8IYE1	715 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	RUFY1	Q96T51	708 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	TRIM55	Q9BYV6	548 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	OR2AG1	Q9H205	316 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	OSGEPL1	Q9H4B0	414 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	FAM83D	Q9H4H8	585 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	PCDH9	Q9HC56	1237 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	AIPL1	Q9NZN9	384 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	MYO6	Q9UM54	1294 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	PCDHB3	Q9Y5E6	796 aa		13.51	□□□□□ -0.25
SAMM50-204	ENST00000493161	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	MATN3	O15232	486 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	RFPL1	O75677	317 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	UBXN7	O94888	489 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	NDUFA10	O95299	355 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	TIAF1	O95411	115 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	HLA-DQB2	P05538	268 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	MMP2	P08253	660 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	RNF224	P0DH78	156 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	SLC2A4	P14672	509 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	SERPINB6	P35237	376 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	GALNT2	Q10471	571 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	SEPT7	Q16181	437 aa	Known RBP	13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	ATP13A4	Q4VNC1	1196 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	NCBP2-AS2	Q69YL0	99 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	ATCAY	Q86WG3	371 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	PHYKPL	Q8IUZ5	450 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	RASGRP3	Q8IV61	690 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	AOPEP	Q8N6M6	819 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	TEKT4	Q8WW24	435 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	RSC1A1	Q92681	617 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	STAMBPL1	Q96FJ0	436 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	LYSMD1	Q96S90	227 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms