RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, human

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP188-208	ENST00000491502	SLC12A2	P55011	1212 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	CBX1	P83916	185 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	ARHGEF7	Q14155	803 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	TEAD4	Q15561	434 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	LYPLAL1	Q5VWZ2	237 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	KIAA0895L	Q68EN5	471 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	ZNF470	Q6ECI4	717 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	IL27RA	Q6UWB1	636 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	RAVER1	Q8IY67	606 aa	Known RBP	13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	CBARP	Q8N350	705 aa	Predicted RBP	13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	OR4K2	Q8NGD2	314 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	OR13J1	Q8NGT2	312 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	PIP4K2C	Q8TBX8	421 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	SNX19	Q92543	992 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	BIRC7	Q96CA5	298 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	TSPAN17	Q96FV3	270 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	CDKN2AIPNL	Q96HQ2	116 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	DNAJC1	Q96KC8	554 aa	Known RBP	13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	ZNF778	Q96MU6	729 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	TSNARE1	Q96NA8	513 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	KLHL32	Q96NJ5	620 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	CAPS2	Q9BXY5	557 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	CDH19	Q9H159	772 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	SLC2A6	Q9UGQ3	507 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	FBXO5	Q9UKT4	447 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	SPO11	Q9Y5K1	396 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	SLC30A1	Q9Y6M5	507 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	NUMA1	Q14980	2115 aa		13.43	□□□□□ -0.26
NUP188-208	ENST00000491502	RGSL1	A5PLK6	1076 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502		H7C0S8	307 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	COPE	O14579	308 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	TM9SF1	O15321	606 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	MPO	P05164	745 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	PIRT	P0C851	137 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	CTPS1	P17812	591 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	HNF1B	P35680	557 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	NUDT1	P36639	197 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	LEPR	P48357	1165 aa	Known RBP	13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	TTPA	P49638	278 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	AFF3	P51826	1226 aa	Known RBP	13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	ELP6	Q0PNE2	266 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	ARSI	Q5FYB1	569 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	MROH9	Q5TGP6	573 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	CERS6	Q6ZMG9	384 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	LCA5	Q86VQ0	697 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	UNC5B	Q8IZJ1	945 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	TTC30B	Q8N4P2	665 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	AADAT	Q8N5Z0	425 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	CHST14	Q8NCH0	376 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	OR14C36	Q8NHC7	312 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	C1orf216	Q8TAB5	229 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	GRIN3A	Q8TCU5	1115 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	DYDC1	Q8WWB3	177 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	FAM131C	Q96AQ9	280 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	SKA1	Q96BD8	255 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	CENPT	Q96BT3	561 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	VPS39	Q96JC1	886 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	TBATA	Q96M53	351 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	NSMCE3	Q96MG7	304 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	GTPBP2	Q9BX10	602 aa	Known RBP	13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	CCDC68	Q9H2F9	335 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	INTS9	Q9NV88	658 aa	Known RBP	13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	INTS10	Q9NVR2	710 aa	Known RBP	13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	PKD2L2	Q9NZM6	624 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	IL17C	Q9P0M4	197 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	SERGEF	Q9UGK8	458 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	SARDH	Q9UL12	918 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	WASF2	Q9Y6W5	498 aa		13.42	□□□□□ -0.26
NUP188-208	ENST00000491502	CACNA1E	Q15878	2313 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	CACNA1A	O00555	2505 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	TBC1D3D	A0A087WVF3	549 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	TBC1D3I	A0A087WXS9	549 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	TBC1D3E	A0A087X179	549 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	TBC1D3K	A0A087X1G2	549 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	TMEM120B	A0PK00	339 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	UPK3BL1	B0FP48	263 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	TBC1D3L	B9A6J9	549 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	UPK3BL2	E5RIL1	263 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	NDUFS3	O75489	264 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	GOT2	P00505	430 aa	Known RBP	13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	SLC4A1	P02730	911 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	TBC1D3H	P0C7X1	549 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	ITGAL	P20701	1170 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	CSRP1	P21291	193 aa	Known RBP	13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	ITGB7	P26010	798 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	CRABP2	P29373	138 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	TYK2	P29597	1187 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	GK	P32189	559 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	VIPR1	P32241	457 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	DRD3	P35462	400 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	MDH1	P40925	334 aa	Known RBP	13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	ATP1A2	P50993	1020 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	TMPRSS15	P98073	1019 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	POU4F1	Q01851	419 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	SLC18A2	Q05940	514 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	CACNG1	Q06432	222 aa		13.41	□□□□□ -0.26
NUP188-208	ENST00000491502	SLC14A1	Q13336	389 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms