RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 TCF7L2Q9NQB0 619 aa22.66■■□□□ 1.22
USF3-203ENST00000491165 OXSMQ9NWU1 459 aa22.66■■□□□ 1.22
USF3-203ENST00000491165 CACNA2D2Q9NY47 1150 aa22.66■■□□□ 1.22
USF3-203ENST00000491165 ASLP04424 464 aa22.65■■□□□ 1.22
USF3-203ENST00000491165 SRPRAP08240 638 aaKnown RBP22.65■■□□□ 1.22
USF3-203ENST00000491165 LRRC36Q1X8D7 754 aa22.65■■□□□ 1.22
USF3-203ENST00000491165 TADA1Q96BN2 335 aa22.65■■□□□ 1.22
USF3-203ENST00000491165 GATA5Q9BWX5 397 aaPredicted RBP22.65■■□□□ 1.22
USF3-203ENST00000491165 IL22Q9GZX6 179 aa22.65■■□□□ 1.22
USF3-203ENST00000491165 TMEM245Q9H330 911 aa22.65■■□□□ 1.22
USF3-203ENST00000491165 IARS2Q9NSE4 1012 aaKnown RBP22.65■■□□□ 1.22
USF3-203ENST00000491165 MUTYHQ9UIF7 546 aa22.65■■□□□ 1.22
USF3-203ENST00000491165 BDP1A6H8Y1 2624 aa22.65■■□□□ 1.22
USF3-203ENST00000491165 HADHAP40939 763 aa22.64■■□□□ 1.22
USF3-203ENST00000491165 MYLKQ15746 1914 aa22.64■■□□□ 1.22
USF3-203ENST00000491165 MLF2Q15773 248 aaPredicted RBP22.64■■□□□ 1.22
USF3-203ENST00000491165 LPCAT4Q643R3 524 aa22.64■■□□□ 1.22
USF3-203ENST00000491165 KDELC2Q7Z4H8 507 aa22.64■■□□□ 1.22
USF3-203ENST00000491165 KLHDC8BQ8IXV7 354 aa22.64■■□□□ 1.22
USF3-203ENST00000491165 HIPK4Q8NE63 616 aa22.64■■□□□ 1.22
USF3-203ENST00000491165 OR2A12Q8NGT7 310 aa22.64■■□□□ 1.22
USF3-203ENST00000491165 AGR3Q8TD06 166 aa22.64■■□□□ 1.22
USF3-203ENST00000491165 FAM3CQ92520 227 aa22.64■■□□□ 1.22
USF3-203ENST00000491165 OR52B2Q96RD2 323 aa22.64■■□□□ 1.22
USF3-203ENST00000491165 MCMBPQ9BTE3 642 aa22.64■■□□□ 1.22
USF3-203ENST00000491165 CHRAC1Q9NRG0 131 aa22.64■■□□□ 1.22
USF3-203ENST00000491165 THAP10Q9P2Z0 257 aaPredicted RBP22.64■■□□□ 1.22
USF3-203ENST00000491165 EVLQ9UI08 416 aaPredicted RBP22.64■■□□□ 1.22
USF3-203ENST00000491165 RNASEH1O60930 286 aaKnown RBP22.64■■□□□ 1.21
USF3-203ENST00000491165 TIE1P35590 1138 aa22.64■■□□□ 1.21
USF3-203ENST00000491165 NSUN2Q08J23 767 aaKnown RBP eCLIP22.64■■□□□ 1.21
USF3-203ENST00000491165 SFT2D3Q587I9 215 aa22.64■■□□□ 1.21
USF3-203ENST00000491165 DPY19L3Q6ZPD9 716 aa22.64■■□□□ 1.21
USF3-203ENST00000491165 BBS5Q8N3I7 341 aa22.64■■□□□ 1.21
USF3-203ENST00000491165 GALNT15Q8N3T1 639 aa22.64■■□□□ 1.21
USF3-203ENST00000491165 ZNF513Q8N8E2 541 aaPredicted RBP22.64■■□□□ 1.21
USF3-203ENST00000491165 CHST14Q8NCH0 376 aa22.64■■□□□ 1.21
USF3-203ENST00000491165 OR2AP1Q8NGE2 309 aa22.64■■□□□ 1.21
USF3-203ENST00000491165 RDH11Q8TC12 318 aa22.64■■□□□ 1.21
USF3-203ENST00000491165 MRGPRX2Q96LB1 330 aa22.64■■□□□ 1.21
USF3-203ENST00000491165 CPSF2Q9P2I0 782 aaKnown RBP22.64■■□□□ 1.21
USF3-203ENST00000491165 ANKRD6Q9Y2G4 727 aa22.64■■□□□ 1.21
USF3-203ENST00000491165 CKAP5Q14008 2032 aa22.64■■□□□ 1.21
USF3-203ENST00000491165 PMPCBO75439 489 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 PEX2P28328 305 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 WASP42768 502 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 CCINQ13939 588 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 PCSK7Q16549 785 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 FNDC3BQ53EP0 1204 aaKnown RBP22.63■■□□□ 1.21
USF3-203ENST00000491165 C2orf27AQ580R0 203 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 EFCAB3Q8N7B9 438 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 ISG20Q96AZ6 181 aaKnown RBP22.63■■□□□ 1.21
USF3-203ENST00000491165 LENG8Q96PV6 779 aaPredicted RBP22.63■■□□□ 1.21
USF3-203ENST00000491165 SH3GL3Q99963 347 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 APOL2Q9BQE5 337 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 NSMCE4AQ9NXX6 385 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 SLC39A10Q9ULF5 831 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 RAP2CQ9Y3L5 183 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 PCDHGC4Q9Y5F7 938 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 NCOR1O75376 2440 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 MATN2O00339 956 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 THRAP10827 490 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 UQCRBP14927 111 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 GLULP15104 373 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 VASPP50552 380 aaPredicted RBP22.63■■□□□ 1.21
USF3-203ENST00000491165 HK2P52789 917 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 ROR2Q01974 943 aaKnown RBP22.63■■□□□ 1.21
USF3-203ENST00000491165 MED21Q13503 144 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 KDELC1Q6UW63 502 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 ZYG11AQ6WRX3 759 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 KBTBD6Q86V97 674 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 GJD3Q8N144 294 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 ACVR1CQ8NER5 493 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 TSNARE1Q96NA8 513 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 CEP44Q9C0F1 390 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 TLK1Q9UKI8 766 aa22.63■■□□□ 1.21
USF3-203ENST00000491165 NDRG2Q9UN36 371 aaKnown RBP22.63■■□□□ 1.21
USF3-203ENST00000491165 MTF2Q9Y483 593 aaPredicted RBP22.63■■□□□ 1.21
USF3-203ENST00000491165 AP3B1O00203 1094 aa22.62■■□□□ 1.21
USF3-203ENST00000491165 HDAC3O15379 428 aa22.62■■□□□ 1.21
USF3-203ENST00000491165 PIGNO95427 931 aa22.62■■□□□ 1.21
USF3-203ENST00000491165 MPSTP25325 297 aa22.62■■□□□ 1.21
USF3-203ENST00000491165 TNFRSF4P43489 277 aa22.62■■□□□ 1.21
USF3-203ENST00000491165 TRIP10Q15642 601 aa22.62■■□□□ 1.21
USF3-203ENST00000491165 LIPMQ5VYY2 423 aa22.62■■□□□ 1.21
USF3-203ENST00000491165 NCEH1Q6PIU2 408 aa22.62■■□□□ 1.21
USF3-203ENST00000491165 SERPINA13PQ6UXR4 307 aa22.62■■□□□ 1.21
USF3-203ENST00000491165 PCDH20Q8N6Y1 951 aaKnown RBP22.62■■□□□ 1.21
USF3-203ENST00000491165 IPMKQ8NFU5 416 aa22.62■■□□□ 1.21
USF3-203ENST00000491165 CNDP1Q96KN2 507 aa22.62■■□□□ 1.21
USF3-203ENST00000491165 GPR22Q99680 433 aa22.62■■□□□ 1.21
USF3-203ENST00000491165 DRC3Q9H069 523 aa22.62■■□□□ 1.21
USF3-203ENST00000491165 SCUBE2Q9NQ36 999 aa22.62■■□□□ 1.21
USF3-203ENST00000491165 CASQ2O14958 399 aaPredicted RBP22.61■■□□□ 1.21
USF3-203ENST00000491165 CHRNGP07510 517 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 TPH1P17752 444 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 SERPINB5P36952 375 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 NNMTP40261 264 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 RPL14P50914 215 aaKnown RBP22.61■■□□□ 1.21
USF3-203ENST00000491165 PRKAA2P54646 552 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms