RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 LILRB5O75023 590 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 HOXC4P09017 264 aaPredicted RBP18.47■□□□□ 0.55
MCF2L-230ENST00000491028 PRSS56P0CW18 603 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 PMLP29590 882 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 CDKN1CP49918 316 aaPredicted RBP18.47■□□□□ 0.55
MCF2L-230ENST00000491028 INPP5AQ14642 412 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 WDR45BQ5MNZ6 344 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 GPRC6AQ5T6X5 926 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 GCNT7Q6ZNI0 430 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 MICALCLQ6ZW33 695 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 HEATR4Q86WZ0 1026 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 CTAGE3PQ8IX95 158 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 PPM1NQ8N819 430 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 DNASE2BQ8WZ79 361 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 COX14Q96I36 57 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 HIC2Q96JB3 615 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 SERAC1Q96JX3 654 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 ZC3H10Q96K80 434 aaKnown RBP18.47■□□□□ 0.55
MCF2L-230ENST00000491028 COPS8Q99627 209 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 PRRX2Q99811 253 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 CPNE1Q99829 537 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 MYOCQ99972 504 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 TEX101Q9BY14 249 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 FAM96AQ9H5X1 160 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 PHPT1Q9NRX4 125 aaPredicted RBP18.47■□□□□ 0.55
MCF2L-230ENST00000491028 ZDHHC3Q9NYG2 299 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 VPS18Q9P253 973 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 TXNDC16Q9P2K2 825 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 TMPRSS11EQ9UL52 423 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 THADAQ6YHU6 1953 aa18.47■□□□□ 0.55
MCF2L-230ENST00000491028 IGLV3-16A0A075B6K0 115 aa18.46■□□□□ 0.55
MCF2L-230ENST00000491028 CXorf49A8MYA2 514 aaPredicted RBP18.46■□□□□ 0.55
MCF2L-230ENST00000491028 HRO43593 1189 aa18.46■□□□□ 0.55
MCF2L-230ENST00000491028 NDUFS3O75489 264 aa18.46■□□□□ 0.55
MCF2L-230ENST00000491028 RHOBTB1O94844 696 aa18.46■□□□□ 0.55
MCF2L-230ENST00000491028 SLC25A14O95258 325 aaPredicted RBP18.46■□□□□ 0.55
MCF2L-230ENST00000491028 IVLP07476 585 aa18.46■□□□□ 0.55
MCF2L-230ENST00000491028 LEPRP48357 1165 aaKnown RBP18.46■□□□□ 0.55
MCF2L-230ENST00000491028 CSE1LP55060 971 aaKnown RBP18.46■□□□□ 0.55
MCF2L-230ENST00000491028 EIF3BP55884 814 aaKnown RBP18.46■□□□□ 0.55
MCF2L-230ENST00000491028 PFN3P60673 137 aa18.46■□□□□ 0.55
MCF2L-230ENST00000491028 YPEL5P62699 121 aa18.46■□□□□ 0.55
MCF2L-230ENST00000491028 CDK3Q00526 305 aa18.46■□□□□ 0.55
MCF2L-230ENST00000491028 SRSF5Q13243 272 aaKnown RBP18.46■□□□□ 0.55
MCF2L-230ENST00000491028 EFTUD2Q15029 972 aaKnown RBP eCLIP18.46■□□□□ 0.553e-6■■■■□ 20.4
MCF2L-230ENST00000491028 DBN1Q16643 649 aa18.46■□□□□ 0.55
MCF2L-230ENST00000491028 PLK5Q496M5 336 aa18.46■□□□□ 0.55
MCF2L-230ENST00000491028 PACS1Q6VY07 963 aa18.46■□□□□ 0.55
MCF2L-230ENST00000491028 CEP68Q76N32 757 aa18.46■□□□□ 0.55
MCF2L-230ENST00000491028 ABI3BPQ7Z7G0 1075 aa18.46■□□□□ 0.55
MCF2L-230ENST00000491028 DENND6AQ8IWF6 608 aa18.46■□□□□ 0.55
MCF2L-230ENST00000491028 RBFAQ8N0V3 343 aa18.46■□□□□ 0.55
MCF2L-230ENST00000491028 CNPY4Q8N129 248 aa18.46■□□□□ 0.55
MCF2L-230ENST00000491028 DEFB119Q8N690 84 aa18.46■□□□□ 0.55
MCF2L-230ENST00000491028 ANKRD7Q92527 254 aa18.46■□□□□ 0.55
MCF2L-230ENST00000491028 ZCCHC2Q9C0B9 1178 aaKnown RBP18.46■□□□□ 0.55
MCF2L-230ENST00000491028 CNOT6Q9ULM6 557 aaKnown RBP18.46■□□□□ 0.55
MCF2L-230ENST00000491028 ZNF318Q5VUA4 2279 aa18.46■□□□□ 0.54
MCF2L-230ENST00000491028 FANCMQ8IYD8 2048 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 CFAP99D6REC4 459 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 CACNB4O00305 520 aaPredicted RBP18.45■□□□□ 0.54
MCF2L-230ENST00000491028 INPP4BO15327 924 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 RALBP11234 206 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 MYCLP1P12525 358 aaPredicted RBP18.45■□□□□ 0.54
MCF2L-230ENST00000491028 ZNF7P17097 686 aaPredicted RBP18.45■□□□□ 0.54
MCF2L-230ENST00000491028 CA5AP35218 305 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 GP5P40197 560 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 PTGER3P43115 390 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 RABIFP47224 123 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 KIAA1024LP59773 190 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 CTBP1Q13363 440 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 LYSMD4Q5XG99 296 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 GDAP1Q8TB36 358 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 SLC44A1Q8WWI5 657 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 BMFQ96LC9 184 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 PAFAH2Q99487 392 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 LRFN3Q9BTN0 628 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 APOOQ9BUR5 198 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 SLC17A6Q9P2U8 582 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 EIF2B4Q9UI10 523 aaKnown RBP18.45■□□□□ 0.54
MCF2L-230ENST00000491028 SLC24A2Q9UI40 661 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 CORO1CQ9ULV4 474 aaPredicted RBP18.45■□□□□ 0.54
MCF2L-230ENST00000491028 PLAAQ9Y263 795 aa18.45■□□□□ 0.54
MCF2L-230ENST00000491028 POM121BA6NF01 834 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 DYNC1I1O14576 645 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 VEGFDO43915 354 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 TCEA3O75764 348 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 S1PR4O95977 384 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 SHBGP04278 402 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 MSH3P20585 1137 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 KELP23276 732 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 AKT1P31749 480 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 NSG1P42857 185 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 CD151P48509 253 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 ADARP55265 1226 aaKnown RBP18.44■□□□□ 0.54
MCF2L-230ENST00000491028 CLDN2P57739 230 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 RACK1P63244 317 aaKnown RBP18.44■□□□□ 0.54
MCF2L-230ENST00000491028 MPP1Q00013 466 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 IFFO1Q0D2I5 559 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 CASP8Q14790 479 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms