RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 TUBB3Q13509 450 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 TP53BP2Q13625 1128 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 ACAP2Q15057 778 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 ZNF284Q2VY69 593 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 NHSL2Q5HYW2 709 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 ARHGAP17Q68EM7 881 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 NECAB2Q7Z6G3 386 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 CCDC117Q8IWD4 279 aaPredicted RBP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 OR13J1Q8NGT2 312 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 OR5K1Q8NHB7 308 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 SLC2A14Q8TDB8 520 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 LGALS12Q96DT0 336 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 HSFY1Q96LI6 401 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 RDH12Q96NR8 316 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 CTRCQ99895 268 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 TMEM39BQ9GZU3 492 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 SMURF2Q9HAU4 748 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 NT5MQ9NPB1 228 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 AFF4Q9UHB7 1163 aaKnown RBP11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 PCDHB3Q9Y5E6 796 aa11.24□□□□□ -0.61
CRNKL1-204ENST00000490910 SLIT2O94813 1529 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 ELOVL7A1L3X0 281 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 YDJCA8MPS7 323 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 G3V2L1 256 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 DHX15O43143 795 aaKnown RBP11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 B4GAT1O43505 415 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 RGS20O76081 388 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 PTTG1O95997 202 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 CYBBP04839 570 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 CHRNB1P11230 501 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 CDH5P33151 784 aaPredicted RBP11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 MATKP42679 507 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 RGS4P49798 205 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 KCNAB2Q13303 367 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 OXA1LQ15070 435 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 DGKKQ5KSL6 1271 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 STEAP4Q687X5 459 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 PMF1Q6P1K2 205 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 LRRC17Q8N6Y2 441 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 VPS37AQ8NEZ2 397 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 CRYGNQ8WXF5 182 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 CENPIQ92674 756 aaPredicted RBP11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 COPS4Q9BT78 406 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 ACAT2Q9BWD1 397 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 WWOXQ9NZC7 414 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 TCAF1Q9Y4C2 921 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 PCDHGA3Q9Y5H0 932 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 A8MT66 165 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 PLK4O00444 970 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 DYNC1LI2O43237 492 aaPredicted RBP11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 XPNPEP2O43895 674 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 B4GALT4O60513 344 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 CD40LGP29965 261 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 S100A3P33764 101 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 CTSKP43235 329 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 PTPN9P43378 593 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 ITGA1P56199 1179 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 MTPNP58546 118 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 GPR158Q5T848 1215 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 DEPDC4Q8N2C3 294 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 CCDC185Q8N715 623 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 MYRFLQ96LU7 910 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 ADAM30Q9UKF2 790 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 FAM50BQ9Y247 325 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 GJA3Q9Y6H8 435 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 PIPSLA2A3N6 862 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 ACOT8O14734 319 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 TEX28O15482 410 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 HBP1O60381 514 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 SEC22BO75396 215 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 TXNP10599 105 aaKnown RBP11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 CD247P20963 164 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 ANGPT1Q15389 498 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 FAM187BQ17R55 369 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 HECTD2Q5U5R9 776 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 ESRP1Q6NXG1 681 aaKnown RBP11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 HACD2Q6Y1H2 254 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 C15orf39Q6ZRI6 1047 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 Q8N9G6 341 aaPredicted RBP11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 GALNT6Q8NCL4 622 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 KCNS3Q9BQ31 491 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 WDR83Q9BRX9 315 aaKnown RBP11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 TTYH2Q9BSA4 534 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 ATP6V1HQ9UI12 483 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 PTPRJQ12913 1337 aa11.23□□□□□ -0.61
CRNKL1-204ENST00000490910 TNFRSF10AO00220 468 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 ABCB1P08183 1280 aaPredicted RBP11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 PTPN3P26045 913 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 TALDO1P37837 337 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 ASPAP45381 313 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 SLC9A3P48764 834 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 TAF6P49848 677 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 HMGCS2P54868 508 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 LRRC74AQ0VAA2 488 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 SV2CQ496J9 727 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 LCN8Q6JVE9 175 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 GPRIN3Q6ZVF9 776 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 TTC29Q8NA56 475 aaPredicted RBP11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 PIK3C3Q8NEB9 887 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 OR13F1Q8NGS4 319 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms