RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 KLHL35Q6PF15 583 aa5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 TSSK4Q6SA08 328 aa5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 MRGPRGQ86SM5 289 aa5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 TAGAPQ8N103 731 aa5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 C1orf131Q8NDD1 294 aaKnown RBP5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 GTF3C6Q969F1 213 aa5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 NSUN4Q96CB9 384 aaKnown RBP5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 FAM120BQ96EK7 910 aaKnown RBP5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 CMTM3Q96MX0 182 aa5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 FRG2BQ96QU4 278 aa5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 SEMA4GQ9NTN9 838 aa5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 KLHL13Q9P2N7 655 aa5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 POLKQ9UBT6 870 aa5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 FBXO40Q9UH90 709 aa5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 RPS6KA6Q9UK32 745 aa5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 GMEB2Q9UKD1 530 aa5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 A4GNTQ9UNA3 340 aa5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 MYRFQ9Y2G1 1151 aa5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 INSL6Q9Y581 213 aa5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 URB1O60287 2271 aaKnown RBP5.03□□□□□ -1.6
SSX2IP-208ENST00000490476 NBEAL1Q6ZS30 2694 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 UTP20O75691 2785 aaKnown RBP5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 MYH3P11055 1940 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 CENPEQ02224 2701 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 TYW5A2RUC4 315 aaKnown RBP5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 FAM157AC9JC47 383 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 FZD7O75084 574 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 TSPAN9O75954 239 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 NEURL1O76050 574 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 TMCC1O94876 653 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 CSH1P0DML2 217 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 CSH2P0DML3 217 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 IRF1P10914 325 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 ACTN1P12814 892 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 GP1BBP13224 206 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 KRT10P13645 584 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 ZNF8P17098 575 aaPredicted RBP5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 RRM1P23921 792 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 YWHAQP27348 245 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 GCH1P30793 250 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 CLCNKBP51801 687 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 TMPRSS3P57727 454 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 KRTAP10-2P60368 255 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 ZXDCQ2QGD7 858 aaPredicted RBP5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 DPCR1Q3MIW9 517 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 ALG10Q5BKT4 473 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 ALG10BQ5I7T1 473 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 EARS2Q5JPH6 523 aaKnown RBP5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 COLEC12Q5KU26 742 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 LRRC8EQ6NSJ5 796 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 CES5AQ6NT32 575 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 HMBOX1Q6NT76 420 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 NCEH1Q6PIU2 408 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 TRIM74Q86UV6 250 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 TRIM73Q86UV7 250 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 LDLRAD3Q86YD5 345 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 DHX40Q8IX18 779 aaKnown RBP5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 RPAP2Q8IXW5 612 aaPredicted RBP5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 Q8N1X5 172 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 DPP10Q8N608 796 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 SNRNP27Q8WVK2 155 aaKnown RBP5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 ARHGEF2Q92974 986 aaKnown RBP5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 PORCNQ9H237 461 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 SH2D4AQ9H788 454 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 SCPEP1Q9HB40 452 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 FBRSL1Q9HCM7 1045 aaKnown RBP5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 PDGFCQ9NRA1 345 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 TRMT112Q9UI30 125 aaKnown RBP5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 SLCO3A1Q9UIG8 710 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 LAMP3Q9UQV4 416 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 TMEM5Q9Y2B1 443 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 ZHX2Q9Y6X8 837 aa5.02□□□□□ -1.61
SSX2IP-208ENST00000490476 CABIN1Q9Y6J0 2220 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 LINC01553A4QN01 128 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 SYNDIG1LA6NDD5 238 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 AGAP14A8MT82 685 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 BTBD18B2RXH4 712 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 KCNK5O95279 499 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 PGK1P00558 417 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 IGLV2-14P01704 120 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 HEXAP06865 529 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 MCM3P25205 808 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 GARSP41250 739 aaKnown RBP5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 ACLYP53396 1101 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 RRP1P56182 461 aaKnown RBP5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 FHL2Q14192 279 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 CRYMQ14894 314 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 DUSP28Q4G0W2 176 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 ENTPD8Q5MY95 495 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 AAGABQ6PD74 315 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 CPLX2Q6PUV4 134 aaKnown RBP5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 ZNF813Q6ZN06 617 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 GSTA5Q7RTV2 222 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 LRRC57Q8N9N7 239 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 C8orf58Q8NAV2 365 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 SMRP1Q8NCR6 262 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 ZNF398Q8TD17 642 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 POMGNT1Q8WZA1 660 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 FAM149B1Q96BN6 582 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 PIMREGQ9BSJ6 248 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms