RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, humanhuman

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-208ENST00000490417 COX14Q96I36 57 aa13.48□□□□□ -0.25
SFXN4-208ENST00000490417 ZNF578Q96N58 590 aaPredicted RBP13.48□□□□□ -0.25
SFXN4-208ENST00000490417 TTC25Q96NG3 672 aa13.48□□□□□ -0.25
SFXN4-208ENST00000490417 DESI2Q9BSY9 194 aa13.48□□□□□ -0.25
SFXN4-208ENST00000490417 FRMD8P1Q9BZ68 369 aaPredicted RBP13.48□□□□□ -0.25
SFXN4-208ENST00000490417 ZCCHC2Q9C0B9 1178 aaKnown RBP13.48□□□□□ -0.25
SFXN4-208ENST00000490417 GBA3Q9H227 469 aa13.48□□□□□ -0.25
SFXN4-208ENST00000490417 CARD9Q9H257 536 aa13.48□□□□□ -0.25
SFXN4-208ENST00000490417 POLR1BQ9H9Y6 1135 aa13.48□□□□□ -0.25
SFXN4-208ENST00000490417 FEZ2Q9UHY8 353 aaPredicted RBP13.48□□□□□ -0.25
SFXN4-208ENST00000490417 TMEM98Q9Y2Y6 226 aa13.48□□□□□ -0.25
SFXN4-208ENST00000490417 ANKRD11Q6UB99 2663 aaPredicted RBP13.48□□□□□ -0.25
SFXN4-208ENST00000490417 USP24Q9UPU5 2620 aa13.48□□□□□ -0.25
SFXN4-208ENST00000490417 AKAP13Q12802 2813 aa13.48□□□□□ -0.25
SFXN4-208ENST00000490417 OR5K4A6NMS3 321 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 C2orf81A6NN90 581 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 VEGFDO43915 354 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 SOD1P00441 154 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 RPLP0P05388 317 aaKnown RBP13.47□□□□□ -0.25
SFXN4-208ENST00000490417 CCDC175P0C221 793 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 VCLP18206 1134 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 CD68P34810 354 aaPredicted RBP13.47□□□□□ -0.25
SFXN4-208ENST00000490417 GPR3P46089 330 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 POLD2P49005 469 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 ITGA9Q13797 1035 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 GTF2H3Q13889 308 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 IHHQ14623 411 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 SLC1A5Q15758 541 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 PYCR3Q53H96 274 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 PERM1Q5SV97 790 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 MARK2Q7KZI7 788 aaKnown RBP13.47□□□□□ -0.25
SFXN4-208ENST00000490417 GLT6D1Q7Z4J2 308 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 MARCH9Q86YJ5 346 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 CCNJLQ8IV13 435 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 PELI3Q8N2H9 469 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 WDR36Q8NI36 951 aaKnown RBP13.47□□□□□ -0.25
SFXN4-208ENST00000490417 DTX3LQ8TDB6 740 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 TMEM159Q96B96 161 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 SH3KBP1Q96B97 665 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 CCDC97Q96F63 343 aaPredicted RBP13.47□□□□□ -0.25
SFXN4-208ENST00000490417 DPYSL5Q9BPU6 564 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 LRRN3Q9H3W5 708 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 TRIM39Q9HCM9 518 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 THSD1Q9NS62 852 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 GUCA1BQ9UMX6 200 aa13.47□□□□□ -0.25
SFXN4-208ENST00000490417 FRYQ5TBA9 3013 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 A0A0U1RQS6 177 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 NTN3O00634 580 aaPredicted RBP13.46□□□□□ -0.25
SFXN4-208ENST00000490417 PSMD3O43242 534 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 GRID2O43424 1007 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 CRTAMO95727 393 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 CAPNS1P04632 268 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 PIRTP0C851 137 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 STIP1P31948 543 aaKnown RBP13.46□□□□□ -0.25
SFXN4-208ENST00000490417 ERVPABLB-1P60509 514 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 GABREP78334 506 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 HLTFQ14527 1009 aaKnown RBP eCLIP13.46□□□□□ -0.25
SFXN4-208ENST00000490417 P3H1Q32P28 736 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 SIRPB2Q5JXA9 342 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 ANKRD20A2Q5SQ80 823 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 ANKRD20A1Q5TYW2 823 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 ANKRD20A3Q5VUR7 823 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 ALS2CLQ60I27 953 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 ARHGEF18Q6ZSZ5 1173 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 RFLNAQ6ZTI6 216 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 CHST15Q7LFX5 561 aaPredicted RBP13.46□□□□□ -0.25
SFXN4-208ENST00000490417 SLC25A41Q8N5S1 370 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 GDAP1Q8TB36 358 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 BLOC1S5Q8TDH9 187 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 ALG3Q92685 438 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 GLYATL1Q969I3 302 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 HES6Q96HZ4 224 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 MRGPRX2Q96LB1 330 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 SPATA13Q96N96 652 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 SMIM14Q96QK8 99 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 AGAP2Q99490 1192 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 HERPUD2Q9BSE4 406 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 PLXNB3Q9ULL4 1909 aa13.46□□□□□ -0.25
SFXN4-208ENST00000490417 SPEGQ15772 3267 aa13.45□□□□□ -0.26
SFXN4-208ENST00000490417 CCDC187A0A096LP49 1063 aa13.45□□□□□ -0.26
SFXN4-208ENST00000490417 C5orf60A6NFR6 353 aa13.45□□□□□ -0.26
SFXN4-208ENST00000490417 KMOO15229 486 aa13.45□□□□□ -0.26
SFXN4-208ENST00000490417 STX7O15400 261 aaKnown RBP13.45□□□□□ -0.26
SFXN4-208ENST00000490417 NUAK1O60285 661 aa13.45□□□□□ -0.26
SFXN4-208ENST00000490417 NOBOXO60393 691 aa13.45□□□□□ -0.26
SFXN4-208ENST00000490417 KCNJ13O60928 360 aa13.45□□□□□ -0.26
SFXN4-208ENST00000490417 FTCDO95954 541 aa13.45□□□□□ -0.26
SFXN4-208ENST00000490417 ATP1A1P05023 1023 aaKnown RBP13.45□□□□□ -0.26
SFXN4-208ENST00000490417 AK4P27144 223 aaPredicted RBP13.45□□□□□ -0.26
SFXN4-208ENST00000490417 SPAM1P38567 509 aa13.45□□□□□ -0.26
SFXN4-208ENST00000490417 PPM1FP49593 454 aaPredicted RBP13.45□□□□□ -0.26
SFXN4-208ENST00000490417 INHBCP55103 352 aa13.45□□□□□ -0.26
SFXN4-208ENST00000490417 CLDN6P56747 220 aa13.45□□□□□ -0.26
SFXN4-208ENST00000490417 TBC1D25Q3MII6 688 aa13.45□□□□□ -0.26
SFXN4-208ENST00000490417 KDELC1Q6UW63 502 aa13.45□□□□□ -0.26
SFXN4-208ENST00000490417 SLC9B2Q86UD5 537 aa13.45□□□□□ -0.26
SFXN4-208ENST00000490417 PIM3Q86V86 326 aa13.45□□□□□ -0.26
SFXN4-208ENST00000490417 Q8N9G6 341 aaPredicted RBP13.45□□□□□ -0.26
SFXN4-208ENST00000490417 CCL4L1Q8NHW4 92 aa13.45□□□□□ -0.26
SFXN4-208ENST00000490417 ANP32BQ92688 251 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms